RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 ZNF720Q7Z2F6 126 aa19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 ERCC4Q92889 916 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 HVCN1Q96D96 273 aa19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 ANO10Q9NW15 660 aa19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 RMND1Q9NWS8 449 aa19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 SEL1LQ9UBV2 794 aa19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-209ENST00000504627 DOCK6Q96HP0 2047 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 ARHGEF37A1IGU5 675 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 M0QZQ0 153 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 TULP1O00294 542 aaPredicted RBP19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 RHOP08100 348 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 GAP43P17677 238 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 AOC1P19801 751 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 CUL4BQ13620 913 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 KCNB1Q14721 858 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 TMEM132DQ14C87 1099 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 SPATA1Q5VX52 437 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 CWF19L1Q69YN2 538 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 TCEAL8Q8IYN2 117 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 ELMOD1Q8N336 334 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 GPR152Q8TDT2 470 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 ING5Q8WYH8 240 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 POMGNT1Q8WZA1 660 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 FGF14Q92915 247 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 CCDC47Q96A33 483 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 RTP3Q9BQQ7 232 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 FAM86C1Q9NVL1 165 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 TBC1D7Q9P0N9 293 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 AFF4Q9UHB7 1163 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 MAN1B1Q9UKM7 699 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 AGO2Q9UKV8 859 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 EXOC7Q9UPT5 735 aa19.48■□□□□ 0.71
SQSTM1-209ENST00000504627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 TISP43B9A030 160 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 SEC24AO95486 1093 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 CAVIN2O95810 425 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 ADRB2P07550 413 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 NPR3P17342 541 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 ASIC1P78348 528 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 ADCY1Q08828 1119 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 IQCEQ6IPM2 695 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 PHOX2BQ99453 314 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 CORO1BQ9BR76 489 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 RPP25Q9BUL9 199 aaKnown RBP19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 OXCT2Q9BYC2 517 aaPredicted RBP19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 GTPBP4Q9BZE4 634 aaKnown RBP19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 BLZF1Q9H2G9 400 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 ASB7Q9H672 318 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 INSL5Q9Y5Q6 135 aa19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 PDCD11Q14690 1871 aaKnown RBP19.47■□□□□ 0.71
SQSTM1-209ENST00000504627 KRBA1A5PL33 1030 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 PI15O43692 258 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 GCNT3O95395 438 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 RPN1P04843 607 aaKnown RBP19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 NFICP08651 508 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 NLRP12P59046 1061 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 RNF19BQ6ZMZ0 732 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 NPAS3Q8IXF0 933 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 DNAJC19Q96DA6 116 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 MCRS1Q96EZ8 462 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 ZNF512Q96ME7 567 aaPredicted RBP19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 ACCSQ96QU6 501 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 MAFFQ9ULX9 164 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 DERAQ9Y315 318 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 STYXL1Q9Y6J8 313 aa19.46■□□□□ 0.71
SQSTM1-209ENST00000504627 PVALEFA0A1B0GWK0 134 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 OAZ2O95190 189 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 ODC1P11926 461 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 PAX3P23760 479 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 CASP1P29466 404 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 AARSP49588 968 aaKnown RBP eCLIP19.45■□□□□ 0.71e-7■□□□□ 8.5
SQSTM1-209ENST00000504627 TWF1Q12792 350 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 MORC3Q14149 939 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 GSE1Q14687 1217 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 L1TD1Q5T7N2 865 aaKnown RBP19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 CYP4A22Q5TCH4 519 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 OVOS1Q6IE37 1185 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 UNC13DQ70J99 1090 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 PDZD4Q76G19 769 aaPredicted RBP19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 SYCP3Q8IZU3 236 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 IKZF4Q9H2S9 585 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 ARHGEF3Q9NR81 526 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 SLC2A4RGQ9NR83 387 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 PANK4Q9NVE7 773 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 GDE1Q9NZC3 331 aa19.45■□□□□ 0.7
SQSTM1-209ENST00000504627 CACNA1HO95180 2353 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 OR6C75A6NL08 312 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 BIN1O00499 593 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 ZNF197O14709 1029 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 PPEF2O14830 753 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 KLRC4O43908 158 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 OR4Q2P0C623 313 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 TYMPP19971 482 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 LILRA4P59901 499 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 GPC5P78333 572 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 SLC5A9Q2M3M2 681 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 C9orf57Q5W0N0 161 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 SENP8Q96LD8 212 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms