RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 C1orf54Q8WWF1 131 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 TFAP2BQ92481 460 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 ATP6V1G3Q96LB4 118 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 RUNDC3BQ96NL0 473 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 PARVAQ9NVD7 372 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 POLIQ9UNA4 740 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 AKT3Q9Y243 479 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 PTPN22Q9Y2R2 807 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 IVNS1ABPQ9Y6Y0 642 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 IL18RAPO95256 599 aa23.9■■□□□ 1.42
PCDH1-204ENST00000503492 VTNP04004 478 aa23.9■■□□□ 1.42
PCDH1-204ENST00000503492 ZNF467Q7Z7K2 595 aaPredicted RBP23.9■■□□□ 1.42
PCDH1-204ENST00000503492 IFNLR1Q8IU57 520 aaPredicted RBP23.9■■□□□ 1.42
PCDH1-204ENST00000503492 SIX4Q9UIU6 781 aa23.9■■□□□ 1.42
PCDH1-204ENST00000503492 ATP8A1Q9Y2Q0 1164 aa23.9■■□□□ 1.42
PCDH1-204ENST00000503492 NFICP08651 508 aa23.89■■□□□ 1.42
PCDH1-204ENST00000503492 STAG3L1P0CL83 205 aa23.89■■□□□ 1.42
PCDH1-204ENST00000503492 GCLCP48506 637 aaPredicted RBP23.89■■□□□ 1.42
PCDH1-204ENST00000503492 SKOR1P84550 965 aa23.89■■□□□ 1.42
PCDH1-204ENST00000503492 SGO2Q562F6 1265 aa23.89■■□□□ 1.42
PCDH1-204ENST00000503492 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.89■■□□□ 1.42
PCDH1-204ENST00000503492 NXF1Q9UBU9 619 aaKnown RBP23.89■■□□□ 1.42
PCDH1-204ENST00000503492 LACTBL1A8MY62 500 aa23.89■■□□□ 1.41
PCDH1-204ENST00000503492 LSM8O95777 96 aaKnown RBP23.89■■□□□ 1.41
PCDH1-204ENST00000503492 RPL7AP62424 266 aaKnown RBP23.89■■□□□ 1.41
PCDH1-204ENST00000503492 ANKRD23Q86SG2 305 aa23.89■■□□□ 1.41
PCDH1-204ENST00000503492 CPB2Q96IY4 423 aa23.89■■□□□ 1.41
PCDH1-204ENST00000503492 CAPS2Q9BXY5 557 aa23.89■■□□□ 1.41
PCDH1-204ENST00000503492 PDZD7Q9H5P4 517 aa23.89■■□□□ 1.41
PCDH1-204ENST00000503492 PSTPIP1O43586 416 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 KRT19P08727 400 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 GPR142Q7Z601 462 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 RHOT1Q8IXI2 618 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 WDTC1Q8N5D0 677 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 C1orf127Q8N9H9 656 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 CHST7Q9NS84 486 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 USTQ9Y2C2 406 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 COL1A2P08123 1366 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 TCRBV5S1A1TA0A578 114 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 MCF2P10911 925 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 MTHFD1LQ6UB35 978 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 TMEM35BQ8NCS4 154 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 PCDHGC3Q9UN70 934 aa23.88■■□□□ 1.41
PCDH1-204ENST00000503492 HMGB1P1B2RPK0 211 aaPredicted RBP23.87■■□□□ 1.41
PCDH1-204ENST00000503492 PPFIA4O75335 1185 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 ERLIN2O94905 339 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 CALB1P05937 261 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 RAP1GAPP47736 663 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 IRAK1P51617 712 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 SNX1Q13596 522 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 JADE1Q6IE81 842 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 DPP9Q86TI2 863 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 H3BRB1 525 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 ECEL1O95672 775 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 MYZAPP0CAP1 466 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 ARF4P18085 180 aaPredicted RBP23.87■■□□□ 1.41
PCDH1-204ENST00000503492 CDH5P33151 784 aaPredicted RBP23.87■■□□□ 1.41
PCDH1-204ENST00000503492 MAN1A1P33908 653 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 SPDYCQ5MJ68 293 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 MAIP1Q8WWC4 291 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 ATG4AQ8WYN0 398 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 SLCO2A1Q92959 643 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 EPB41L4BQ9H329 900 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 TUT1Q9H6E5 874 aaKnown RBP23.87■■□□□ 1.41
PCDH1-204ENST00000503492 PASKQ96RG2 1323 aa23.87■■□□□ 1.41
PCDH1-204ENST00000503492 TMEM191CA6NGB0 347 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 GOLGA6L10A6NI86 522 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 SMPD1P17405 629 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 TNFAIP2Q03169 654 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 KDM7AQ6ZMT4 941 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 KATNAL2Q8IYT4 538 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 MAML3Q96JK9 1138 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 ZNF518BQ9C0D4 1074 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 CALCOCO1Q9P1Z2 691 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 IP6K2Q9UHH9 426 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 RALAP11233 206 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 TMOD1P28289 359 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 GBP1P32455 592 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 ATP1A2P50993 1020 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 ZNF252P-AS1Q0IIN9 211 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 GRB14Q14449 540 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 ZNF667Q5HYK9 610 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 TTC19Q6DKK2 380 aaPredicted RBP23.86■■□□□ 1.41
PCDH1-204ENST00000503492 CCDC50Q8IVM0 306 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 CXorf38Q8TB03 319 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 BCO2Q9BYV7 579 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 SDCBP2Q9H190 292 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 PARP2Q9UGN5 583 aa23.86■■□□□ 1.41
PCDH1-204ENST00000503492 EIF4BP23588 611 aaKnown RBP23.85■■□□□ 1.41
PCDH1-204ENST00000503492 CDH8P55286 799 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 YWHAEP62258 255 aaKnown RBP23.85■■□□□ 1.41
PCDH1-204ENST00000503492 KLF1Q13351 362 aaPredicted RBP23.85■■□□□ 1.41
PCDH1-204ENST00000503492 GPR162Q16538 588 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 WDR72Q3MJ13 1102 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 EMC10Q5UCC4 262 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 HEMGNQ9BXL5 484 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 DCLK3Q9C098 648 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 CENPHQ9H3R5 247 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 LRRC4CQ9HCJ2 640 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 R3HDM2Q9Y2K5 976 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms