RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PPP4R3AQ6IN85 833 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 EFCAB12Q6NXP0 572 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 TTC7BQ86TV6 843 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 RSPH3Q86UC2 560 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 DGKHQ86XP1 1220 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 DRC7Q8IY82 874 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 FAM43AQ8N2R8 423 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 SLC44A3Q8N4M1 653 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZBTB34Q8NCN2 500 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 REPS2Q8NFH8 660 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 PPP1R35Q8TAP8 253 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 MDM1Q8TC05 714 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 STON2Q8WXE9 905 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 RUNDC1Q96C34 613 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 TIFAQ96CG3 184 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 CYFIP2Q96F07 1278 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 UROC1Q96N76 676 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 CDC5LQ99459 802 aaKnown RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 ALOXE3Q9BYJ1 711 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 SENP6Q9GZR1 1112 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 MANSC1Q9H8J5 431 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 PRDM11Q9NQV5 511 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 C1orf112Q9NSG2 853 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 TDP1Q9NUW8 608 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 LRIT1Q9P2V4 623 aa3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 DDX20Q9UHI6 824 aaKnown RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 CFAP20Q9Y6A4 193 aaKnown RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 FRMPD2Q68DX3 1309 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 MYBBP1AQ9BQG0 1328 aaKnown RBP3.11□□□□□ -1.91
HMGB1P35-201ENST00000503360 TRIM38O00635 465 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 SGTAO43765 313 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CAND2O75155 1236 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 FTLP02792 175 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 AMY1AP04745 511 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 KRT18P05783 430 aaKnown RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 PROK1P58294 105 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CDC42EP1Q00587 391 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 APBA1Q02410 837 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 TARDBPQ13148 414 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 GBX1Q14549 363 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 KLHL22Q53GT1 634 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCDC157Q569K6 752 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 PRAMEF14Q5SWL7 426 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 GPR149Q86SP6 731 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 DENND1CQ8IV53 801 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCAR1Q8IX12 1150 aaKnown RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCDC146Q8IYE0 955 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 TRMT2AQ8IZ69 625 aaKnown RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZGPATQ8N5A5 531 aaKnown RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZFP28Q8NHY6 868 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 HASPINQ8TF76 798 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 RGMAQ96B86 450 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 TMX3Q96JJ7 454 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CLPTM1LQ96KA5 538 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 Q96MF0 132 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 DMRTA2Q96SC8 542 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 CGRRF1Q99675 332 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 HEPHQ9BQS7 1158 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 TEX101Q9BY14 249 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 SPON1Q9HCB6 807 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 LANCL2Q9NS86 450 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 TMEM140Q9NV12 185 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 AJAP1Q9UKB5 411 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF804BA4D1E1 1349 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZMYM3Q14202 1370 aa3.1□□□□□ -1.91
HMGB1P35-201ENST00000503360 LRRC14BA6NHZ5 514 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 H3BML4 177 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 PJA2O43164 708 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 GPR32O75388 356 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 TUSC2O75896 110 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 UBXN7O94888 489 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 IL2RBP14784 551 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 DDCP20711 480 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 FPR1P21462 350 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 PCSK1P29120 753 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 GUCY1A2P33402 732 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 MAP2K6P52564 334 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 MRPS35P82673 323 aaKnown RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 HLTFQ14527 1009 aaKnown RBP eCLIP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 LLGL1Q15334 1064 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 KHDC1Q4VXA5 237 aaKnown RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 THEMIS2Q5TEJ8 643 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 KSR2Q6VAB6 950 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 GADL1Q6ZQY3 521 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 PDZD4Q76G19 769 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 OVCH2Q7RTZ1 564 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF572Q7Z3I7 529 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 ARHGEF25Q86VW2 580 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 RHOT2Q8IXI1 618 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 TMEM132CQ8N3T6 1108 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 C3orf20Q8ND61 904 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 NSUN6Q8TEA1 469 aaKnown RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 CEP95Q96GE4 821 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 MRGPRX4Q96LA9 322 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 VRK1Q99986 396 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 KLK15Q9H2R5 256 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 MAN1C1Q9NR34 630 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 TBCCD1Q9NVR7 557 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 FLRT1Q9NZU1 646 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms