RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ARMCX3Q9UH62 379 aaPredicted RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 R3HCC1Q9Y3T6 440 aaKnown RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 ATICP31939 592 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 RAB33AQ14088 237 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 ZNF280DQ6N043 979 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 SLC35C1Q96A29 364 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 SYAP1Q96A49 352 aaPredicted RBP27.01■■□□□ 1.91
LSM6-202ENST00000502781 FBXL5Q9UKA1 691 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 DSEQ9UL01 958 aa27.01■■□□□ 1.91
LSM6-202ENST00000502781 GNA14O95837 355 aa27■■□□□ 1.91
LSM6-202ENST00000502781 EPCAMP16422 314 aa27■■□□□ 1.91
LSM6-202ENST00000502781 OR1D2P34982 312 aa27■■□□□ 1.91
LSM6-202ENST00000502781 GCLMP48507 274 aa27■■□□□ 1.91
LSM6-202ENST00000502781 MYL6P60660 151 aa27■■□□□ 1.91
LSM6-202ENST00000502781 BIRC3Q13489 604 aa27■■□□□ 1.91
LSM6-202ENST00000502781 TRPC3Q13507 836 aa27■■□□□ 1.91
LSM6-202ENST00000502781 NCOA4Q13772 614 aa27■■□□□ 1.91
LSM6-202ENST00000502781 OVOS1Q6IE37 1185 aa27■■□□□ 1.91
LSM6-202ENST00000502781 SASS6Q6UVJ0 657 aa27■■□□□ 1.91
LSM6-202ENST00000502781 CASP10Q92851 521 aa27■■□□□ 1.91
LSM6-202ENST00000502781 MSLNLQ96KJ4 702 aa27■■□□□ 1.91
LSM6-202ENST00000502781 OXCT2Q9BYC2 517 aaPredicted RBP27■■□□□ 1.91
LSM6-202ENST00000502781 TMEM8AQ9HCN3 771 aa27■■□□□ 1.91
LSM6-202ENST00000502781 L1RE1Q9UN81 338 aa27■■□□□ 1.91
LSM6-202ENST00000502781 CDY1Q9Y6F8 540 aa27■■□□□ 1.91
LSM6-202ENST00000502781 SPTBN5Q9NRC6 3674 aaKnown RBP26.99■■□□□ 1.91
LSM6-202ENST00000502781 PHACTR2O75167 634 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 CTXN3Q4LDR2 81 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 WSCD1Q658N2 575 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 DPH6Q7L8W6 267 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 TOP6BLQ8N6T0 577 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 THEGQ9P2T0 379 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 BARX2Q9UMQ3 279 aaPredicted RBP26.99■■□□□ 1.91
LSM6-202ENST00000502781 SNX9Q9Y5X1 595 aa26.99■■□□□ 1.91
LSM6-202ENST00000502781 TGM5O43548 720 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 STX10O60499 249 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 FGFR1OPO95684 399 aaKnown RBP26.98■■□□□ 1.91
LSM6-202ENST00000502781 GLUD1P00367 558 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 KRT39Q6A163 491 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 LLGL2Q6P1M3 1020 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 GLYCTKQ8IVS8 523 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 PDCL2Q8N4E4 241 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 SPATA18Q8TC71 538 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 ANO10Q9NW15 660 aa26.98■■□□□ 1.91
LSM6-202ENST00000502781 HUS1O60921 280 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 SRGAP2BP0DMP2 458 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 KCNA5P22460 613 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 ROR1Q01973 937 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 SOWAHAQ2M3V2 549 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 CCDC40Q4G0X9 1142 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 ANKRD54Q6NXT1 300 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 PALB2Q86YC2 1186 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 IRF2BP1Q8IU81 584 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TRIM59Q8IWR1 403 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TMEM86AQ8N2M4 240 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TAS1R2Q8TE23 839 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 HDAC7Q8WUI4 952 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 RTP3Q9BQQ7 232 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 OR6C75A6NL08 312 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 ABLIM3O94929 683 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 HLA-DRAP01903 254 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 MXI1P50539 228 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 STX1AQ16623 288 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 SKOR2Q2VWA4 1001 aaPredicted RBP26.97■■□□□ 1.91
LSM6-202ENST00000502781 WDR72Q3MJ13 1102 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 LEXMQ3ZCV2 418 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TCERG1LQ5VWI1 586 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 EP400NLQ6ZTU2 488 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 ZNF461Q8TAF7 563 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TAF4BQ92750 862 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 DZANK1Q9NVP4 752 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 FBXW11Q9UKB1 542 aa26.97■■□□□ 1.91
LSM6-202ENST00000502781 TSC2P49815 1807 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 GABRDO14764 452 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 ASS1P00966 412 aaKnown RBP26.96■■□□□ 1.91
LSM6-202ENST00000502781 FAM163BP0C2L3 166 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 HOXB8P17481 243 aaPredicted RBP26.96■■□□□ 1.91
LSM6-202ENST00000502781 TFF2Q03403 129 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 SGSM1Q2NKQ1 1148 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 ZNF699Q32M78 642 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 DCAF17Q5H9S7 520 aaPredicted RBP26.96■■□□□ 1.91
LSM6-202ENST00000502781 SYCE2Q6PIF2 218 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 METTL23Q86XA0 190 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 PLEKHA4Q9H4M7 779 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 COQ4Q9Y3A0 265 aa26.96■■□□□ 1.91
LSM6-202ENST00000502781 WDR27A2RRH5 827 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 H3BQ06 376 aaPredicted RBP26.95■■□□□ 1.9
LSM6-202ENST00000502781 PMM2O15305 246 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 PAPLNO95428 1278 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 CBWD6Q4V339 395 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 CBWD3Q5JTY5 395 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 CBWD5Q5RIA9 395 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 C11orf57Q6ZUT1 292 aaPredicted RBP26.95■■□□□ 1.9
LSM6-202ENST00000502781 SMRP1Q8NCR6 262 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 OR10T2Q8NGX3 314 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 ENOX1Q8TC92 643 aaKnown RBP26.95■■□□□ 1.9
LSM6-202ENST00000502781 KBTBD7Q8WVZ9 684 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 THAP9Q9H5L6 903 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 MMRN2Q9H8L6 949 aa26.95■■□□□ 1.9
LSM6-202ENST00000502781 MAN1C1Q9NR34 630 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms