RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CBWD6Q4V339 395 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 CBWD3Q5JTY5 395 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 CBWD5Q5RIA9 395 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 CFAP58Q5T655 872 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 LRCH2Q5VUJ6 765 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 GPR155Q7Z3F1 870 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 NRSN1Q8IZ57 195 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 MICALL1Q8N3F8 863 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 OLIG1Q8TAK6 271 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 BCAS4Q8TDM0 211 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 GPR152Q8TDT2 470 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 POLR3CQ9BUI4 534 aaPredicted RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 KATNAL1Q9BW62 490 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 MRPL9Q9BYD2 267 aaKnown RBP9.53□□□□□ -0.88
FN1-227ENST00000498719 VPS33BQ9H267 617 aa9.53□□□□□ -0.88
FN1-227ENST00000498719 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 FZD9O00144 591 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 LRRN2O75325 713 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 FLOT1O75955 427 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 MT-CO1P00395 513 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 ABCB4P21439 1286 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 RPL13P26373 211 aaKnown RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 ECHS1P30084 290 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PRKCIP41743 596 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PCBP2Q15366 365 aaKnown RBP eCLIP9.52□□□□□ -0.89
FN1-227ENST00000498719 C1orf186Q6ZWK4 172 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 ENOSF1Q7L5Y1 443 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TEX9Q8N6V9 391 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 OR2W6PQ8NHA6 318 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 KISS1RQ969F8 398 aaPredicted RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 FIZ1Q96SL8 496 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 OLFML3Q9NRN5 406 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 NENFQ9UMX5 172 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 NOC2LQ9Y3T9 749 aaKnown RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 SAMM50Q9Y512 469 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 BZW2Q9Y6E2 419 aaKnown RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 CLRN2A0PK11 232 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 BTNL10A8MVZ5 291 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TISP43B9A030 160 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 B9A039 149 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
FN1-227ENST00000498719 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 PPP1R12BO60237 982 aaPredicted RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 PSMD10O75832 226 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 HSD3B1P14060 373 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 CHRNA5P30532 468 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TRPC1P48995 793 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 STAT2P52630 851 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 GALCP54803 685 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TNNC1P63316 161 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PWP1Q13610 501 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 FAM47EQ6ZV65 393 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PEX26Q7Z412 305 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 WDR12Q9GZL7 423 aaKnown RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 TCF7L1Q9HCS4 588 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TOPORSQ9NS56 1045 aaPredicted RBP9.52□□□□□ -0.89
FN1-227ENST00000498719 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 AMACRQ9UHK6 382 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
FN1-227ENST00000498719 TMEM110-MUSTN1A8MSY1 372 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 DDX39AO00148 427 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 SLC16A3O15427 465 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 ZEB2O60315 1214 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 CYP3A4P08684 503 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 H2AFZP0C0S5 128 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ARP10275 920 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 RHCEP18577 417 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 GRK6P43250 576 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 FMO5P49326 533 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 PLIN5Q00G26 463 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 GUCY1A3Q02108 690 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 RHDQ02161 417 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ZNF252P-AS1Q0IIN9 211 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 DRAP1Q14919 205 aaPredicted RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ARMC4Q5T2S8 1044 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 YOD1Q5VVQ6 348 aaPredicted RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ITPRIPL1Q6GPH6 555 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 BTNL9Q6UXG8 535 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 H2AFVQ71UI9 128 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 LSRQ86X29 649 aaPredicted RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 SH2D3AQ9BRG2 576 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 CELF4Q9BZC1 486 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 MTFR1LQ9H019 292 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 MYLK2Q9H1R3 596 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 CENPHQ9H3R5 247 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 TAF1DQ9H5J8 278 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms