RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 GDAP2Q9NXN4 497 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 AIPL1Q9NZN9 384 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
SCG5-209ENST00000498607 NRDCO43847 1150 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 B4GALT3O60512 393 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 DGKIO75912 1065 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 UPP2O95045 317 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 FERP16591 822 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 EPHB4P54760 987 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 ASIC2Q16515 512 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 MEA1Q16626 185 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 UPP1Q16831 310 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
SCG5-209ENST00000498607 SCARA5Q6ZMJ2 495 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 COLGALT2Q8IYK4 626 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 FAM71AQ8IYT1 594 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 UBR7Q8N806 425 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
SCG5-209ENST00000498607 ARID3AQ99856 593 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCG5-209ENST00000498607 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 FAM124BQ9H5Z6 455 aaPredicted RBP12.49□□□□□ -0.41
SCG5-209ENST00000498607 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 CACNG4Q9UBN1 327 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 NXF1Q9UBU9 619 aaKnown RBP12.49□□□□□ -0.41
SCG5-209ENST00000498607 POLIQ9UNA4 740 aa12.49□□□□□ -0.41
SCG5-209ENST00000498607 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 KPNA7A9QM74 516 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 TMEM189-UBE2V1I3L0A0 370 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 SPTLC1O15269 473 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 DDHD2O94830 711 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 PRKCIP41743 596 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCG5-209ENST00000498607 CLCNKBP51801 687 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 LILRA4P59901 499 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 CDK17Q00537 523 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 DCLRE1AQ6PJP8 1040 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 ZNF280BQ86YH2 543 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 TMEM139Q8IV31 216 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 TTC39CQ8N584 583 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 PAAF1Q9BRP4 392 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 TMEM175Q9BSA9 504 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
SCG5-209ENST00000498607 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 RC3H2Q9HBD1 1191 aaKnown RBP12.48□□□□□ -0.41
SCG5-209ENST00000498607 CNTN6Q9UQ52 1028 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 TSC2P49815 1807 aa12.48□□□□□ -0.41
SCG5-209ENST00000498607 GFPT2O94808 682 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 ACO1P21399 889 aaKnown RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 CCZ1BP86790 482 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 CCZ1P86791 482 aaPredicted RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 HGSNATQ68CP4 663 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 CYP26C1Q6V0L0 522 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 IRF2BP2Q7Z5L9 587 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 CMTR2Q8IYT2 770 aaKnown RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 ZNF689Q96CS4 500 aaPredicted RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 MMS19Q96T76 1030 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 SLC9A7Q96T83 725 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 BAG1Q99933 345 aaPredicted RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 SDCBP2Q9H190 292 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 KCNF1Q9H3M0 494 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 CISHQ9NSE2 258 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 DNAJB4Q9UDY4 337 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 PCDHB4Q9Y5E5 795 aa12.47□□□□□ -0.41
SCG5-209ENST00000498607 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
SCG5-209ENST00000498607 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 HUS1O60921 280 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 CILPO75339 1184 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 TACC1O75410 805 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 B3GAT3O94766 335 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 KIF4AO95239 1232 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 SERPING1P05155 500 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 FAM163BP0C2L3 166 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 KRT5P13647 590 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 USP8P40818 1118 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 RAP1GAPP47736 663 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 ZNF132P52740 706 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 ARID5AQ03989 594 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 INCA1Q0VD86 236 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.41
SCG5-209ENST00000498607 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
SCG5-209ENST00000498607 TMTC1Q8IUR5 882 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms