RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TMPRSS9Q7Z410 1059 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 RAVER1Q8IY67 606 aaKnown RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 CLPTM1LQ96KA5 538 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 MRGPRX4Q96LA9 322 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 RHOBTB2Q9BYZ6 727 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 C11orf54Q9H0W9 315 aaPredicted RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 CDH19Q9H159 772 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 SEMA4GQ9NTN9 838 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 KCTD5Q9NXV2 234 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 TESQ9UGI8 421 aaKnown RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 LIMCH1Q9UPQ0 1083 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 CFAP20Q9Y6A4 193 aaKnown RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 KIAA0391O15091 583 aaKnown RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 ABLIM3O94929 683 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 MATN4O95460 622 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 FTLP02792 175 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 CD38P28907 300 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 CACNA2D1P54289 1103 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 ELLP55199 621 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 CDC42EP1Q00587 391 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 MLC1Q15049 377 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 LRRC41Q15345 812 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 NFE2Q16621 373 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 ERCC6LQ2NKX8 1250 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 C3orf36Q3SXR2 165 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 FLYWCH1Q4VC44 716 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 USP45Q70EL2 814 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 AOPEPQ8N6M6 819 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 BOLLQ8N9W6 283 aaKnown RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 IL17RDQ8NFM7 739 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 NLGN4YQ8NFZ3 816 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 TBC1D15Q8TC07 691 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 CAGE1Q8TC20 777 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 SSH3Q8TE77 659 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 AIFM2Q9BRQ8 373 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 TLR10Q9BXR5 811 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 RTFDC1Q9BY42 306 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 CTTNBP2NLQ9P2B4 639 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-205ENST00000497722 SERPINB13Q9UIV8 391 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 TLK1Q9UKI8 766 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 POLHQ9Y253 713 aa4.17□□□□□ -1.74
PSPC1-205ENST00000497722 PROM1O43490 865 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 TSPAN6O43657 245 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SGTAO43765 313 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 MARCH6O60337 910 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SLC43A1O75387 559 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 RFPL1O75677 317 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 HAUS5O94927 633 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 ZRANB2O95218 330 aaKnown RBP eCLIP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 POU2F2P09086 479 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SRGNP10124 158 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 GTF2H3Q13889 308 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 GFOD2Q3B7J2 385 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 FAM102BQ5T8I3 360 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 CXorf57Q6NSI4 855 aaKnown RBP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 VWA1Q6PCB0 445 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 FOXR2Q6PJQ5 311 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 COLGALT2Q8IYK4 626 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SH2D3CQ8N5H7 860 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 C3orf20Q8ND61 904 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 TSR2Q969E8 191 aaKnown RBP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 RGMAQ96B86 450 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 MTFMTQ96DP5 389 aaKnown RBP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 MVB12AQ96EY5 273 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 PTCD3Q96EY7 689 aaKnown RBP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 LRIG1Q96JA1 1093 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 CAMKK2Q96RR4 588 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 DUSP26Q9BV47 211 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
PSPC1-205ENST00000497722 TCF7L1Q9HCS4 588 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SLAMF7Q9NQ25 335 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 CASS4Q9NQ75 786 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 CNNM1Q9NRU3 951 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 CHPF2Q9P2E5 772 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 PCDHB1Q9Y5F3 818 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 SPATA31A6Q5VVP1 1343 aa4.16□□□□□ -1.74
PSPC1-205ENST00000497722 H3BUI4 141 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 INO80B-WBP1J3KQ70 363 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 GRM6O15303 877 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 CTNND1O60716 968 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 ARIH2O95376 493 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 GNAI3P08754 354 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 FOLR3P41439 243 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 ZNF280AP59817 542 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 GNAI1P63096 354 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 MRPS35P82673 323 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 TLE1Q04724 770 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 ZNF267Q14586 743 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 RAB39AQ14964 217 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 PABPC1LQ4VXU2 614 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 CCAR1Q8IX12 1150 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 KLHL32Q96NJ5 620 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 AIFM3Q96NN9 605 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 VRK1Q99986 396 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 PACSIN1Q9BY11 444 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 INO80BQ9C086 356 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 ADARB2Q9NS39 739 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms