RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SEC24DO94855 1032 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ABHD16AO95870 558 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ANXA1P04083 346 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 HDCP19113 662 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 TGM1P22735 817 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ABCD3P28288 659 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 MLH1P40692 756 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 NRG3P56975 720 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 PKN2Q16513 984 aaKnown RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 MAPKAPK3Q16644 382 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 SLC44A4Q53GD3 710 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 GJC2Q5T442 439 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 FAM47EQ6ZV65 393 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ANKS1BQ7Z6G8 1248 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ARMC8Q8IUR7 673 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 OR8H1Q8NGG4 311 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 CSGALNACT1Q8TDX6 532 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 TBC1D22AQ8WUA7 517 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 CFHR4Q92496 578 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 CCDC34Q96HJ3 373 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 NCAPGQ9BPX3 1015 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 MXD3Q9BW11 206 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 SIL1Q9H173 461 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 ACAD9Q9H845 621 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 SPON1Q9HCB6 807 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 UCKL1Q9NWZ5 548 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 TMOD4Q9NZQ9 345 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 RGS17Q9UGC6 210 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 C19orf53Q9UNZ5 99 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-224ENST00000497488 LMTK3Q96Q04 1460 aa6.76□□□□□ -1.33
BRCA1-224ENST00000497488 C17orf113A0A1B0GUU1 675 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 GNAT3A8MTJ3 354 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 PYCARD-AS1I3L0S3 204 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 KIAA0355O15063 1070 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 AKR1B10O60218 316 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 PGM3O95394 542 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 MPIG6BO95866 241 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 CNPP09543 421 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 EGR1P18146 543 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 SLC6A11P48066 632 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 KCNC1P48547 511 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 DLG4P78352 724 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 CREB5Q02930 508 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 GRIN1Q05586 938 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 BAK1Q16611 211 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 CASC1Q6TDU7 716 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 KRT28Q7Z3Y7 464 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 TMEM130Q8N3G9 435 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 DCBLD1Q8N8Z6 715 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 REEP2Q9BRK0 252 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 ITPAQ9BY32 194 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 ABHD16BQ9H3Z7 469 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 SYNCQ9H7C4 482 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 GRPEL1Q9HAV7 217 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 EIF2B3Q9NR50 452 aaKnown RBP6.75□□□□□ -1.33
BRCA1-224ENST00000497488 DUSP13Q9UII6 198 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 ABCA10Q8WWZ4 1543 aa6.75□□□□□ -1.33
BRCA1-224ENST00000497488 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 MBD3L4A6NDZ8 208 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 MBD3L3A6NE82 208 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 F2RL2O00254 374 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 GJB3O75712 270 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 KRT1P04264 644 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 NTRK1P04629 796 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 NR2F1P10589 423 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 KLRC1P26715 233 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 RPL10P27635 214 aaKnown RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 LTKP29376 864 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 GALK1P51570 392 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 CORO7P57737 925 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 MGAT5Q09328 741 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 GALNT2Q10471 571 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 DBPQ10586 325 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 SCAPQ12770 1279 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 RAB32Q13637 225 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 ASIC2Q16515 512 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TRIM71Q2Q1W2 868 aaKnown RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TMTC4Q5T4D3 741 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 USP17L6PQ6QN14 398 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 KIAA0408Q6ZU52 694 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 ARL6IP6Q8N6S5 226 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TOR1AIP2Q8NFQ8 470 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 CALML6Q8TD86 181 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 BCL7CQ8WUZ0 217 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TRAPPC9Q96Q05 1148 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 SPAG5Q96R06 1193 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 GPATCH1Q9BRR8 931 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms