RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.01■□□□□ 0.31
PMF1-205ENST00000497069 GDAP2Q9NXN4 497 aa17.01■□□□□ 0.31
PMF1-205ENST00000497069 NXF1Q9UBU9 619 aaKnown RBP17.01■□□□□ 0.31
PMF1-205ENST00000497069 TIMM13Q9Y5L4 95 aaPredicted RBP17.01■□□□□ 0.31
PMF1-205ENST00000497069 H7C4K7 107 aa17■□□□□ 0.31
PMF1-205ENST00000497069 FSCN2O14926 492 aa17■□□□□ 0.31
PMF1-205ENST00000497069 PMM2O15305 246 aa17■□□□□ 0.31
PMF1-205ENST00000497069 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
PMF1-205ENST00000497069 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
PMF1-205ENST00000497069 CAMK1Q14012 370 aa17■□□□□ 0.31
PMF1-205ENST00000497069 KRT31Q15323 416 aa17■□□□□ 0.31
PMF1-205ENST00000497069 PTPN14Q15678 1187 aa17■□□□□ 0.31
PMF1-205ENST00000497069 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
PMF1-205ENST00000497069 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
PMF1-205ENST00000497069 DPH6Q7L8W6 267 aa17■□□□□ 0.31
PMF1-205ENST00000497069 LUZP1Q86V48 1076 aa17■□□□□ 0.31
PMF1-205ENST00000497069 GPR65Q8IYL9 337 aa17■□□□□ 0.31
PMF1-205ENST00000497069 TOP6BLQ8N6T0 577 aa17■□□□□ 0.31
PMF1-205ENST00000497069 MRPL43Q8N983 215 aaKnown RBP17■□□□□ 0.31
PMF1-205ENST00000497069 XYLT2Q9H1B5 865 aa17■□□□□ 0.31
PMF1-205ENST00000497069 VPS16Q9H269 839 aa17■□□□□ 0.31
PMF1-205ENST00000497069 NSUN3Q9H649 340 aaKnown RBP17■□□□□ 0.31
PMF1-205ENST00000497069 VRTNQ9H8Y1 702 aa17■□□□□ 0.31
PMF1-205ENST00000497069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.317e-11■■■■■ 48.1
PMF1-205ENST00000497069 MTMR10Q9NXD2 777 aa17■□□□□ 0.31
PMF1-205ENST00000497069 TAB2Q9NYJ8 693 aa17■□□□□ 0.31
PMF1-205ENST00000497069 COQ4Q9Y3A0 265 aa17■□□□□ 0.31
PMF1-205ENST00000497069 MTCH2Q9Y6C9 303 aa17■□□□□ 0.31
PMF1-205ENST00000497069 COL4A4P53420 1690 aaPredicted RBP17■□□□□ 0.31
PMF1-205ENST00000497069 PLXNA4Q9HCM2 1894 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 CYP11A1P05108 521 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 FOSL2P15408 326 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 ZNF18P17022 549 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 POU3F3P20264 500 aaPredicted RBP16.99■□□□□ 0.31
PMF1-205ENST00000497069 NOP14P78316 857 aaKnown RBP16.99■□□□□ 0.31
PMF1-205ENST00000497069 ADGRE1Q14246 886 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 PSMD5Q16401 504 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 OVOS1Q6IE37 1185 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 ZNF280DQ6N043 979 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 THEM5Q8N1Q8 247 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 TMEM86AQ8N2M4 240 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 MICALL1Q8N3F8 863 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 PI4K2AQ9BTU6 479 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 LIMA1Q9UHB6 759 aaKnown RBP16.99■□□□□ 0.31
PMF1-205ENST00000497069 IRAK3Q9Y616 596 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 CHD7Q9P2D1 2997 aa16.99■□□□□ 0.31
PMF1-205ENST00000497069 C2orf71A6NGG8 1288 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 HIDE1A8MVS5 230 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
PMF1-205ENST00000497069 CTXN3Q4LDR2 81 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 FKBP15Q5T1M5 1219 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 WSCD1Q658N2 575 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 SPOPLQ6IQ16 392 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 PRSS55Q6UWB4 352 aaPredicted RBP16.98■□□□□ 0.31
PMF1-205ENST00000497069 SCARA5Q6ZMJ2 495 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 ADGRF2Q8IZF7 708 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 LNX1Q8TBB1 728 aaPredicted RBP16.98■□□□□ 0.31
PMF1-205ENST00000497069 SEMA4DQ92854 862 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 GUCD1Q96NT3 240 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
PMF1-205ENST00000497069 NIF3L1Q9GZT8 377 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 TLE6Q9H808 572 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 GCNT4Q9P109 453 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 FNIP2Q9P278 1114 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 L1RE1Q9UN81 338 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 PCDHGC5Q9Y5F6 944 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
PMF1-205ENST00000497069 LILRB3O75022 631 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 ATP1A3P13637 1013 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 KLRC2P26717 231 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 LHX1P48742 406 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 NDUFV1P49821 464 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 LRMPQ12912 555 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 SOWAHAQ2M3V2 549 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 FILIP1LQ4L180 1135 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 MIIPQ5JXC2 388 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 RBM23Q86U06 439 aaKnown RBP16.97■□□□□ 0.31
PMF1-205ENST00000497069 SPATA18Q8TC71 538 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 ELMO3Q96BJ8 720 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 NT5C1BQ96P26 610 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 KLHL5Q96PQ7 755 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 INTS2Q9H0H0 1204 aaKnown RBP16.97■□□□□ 0.31
PMF1-205ENST00000497069 HSD3B7Q9H2F3 369 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 SNX25Q9H3E2 840 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 RXFP1Q9HBX9 757 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 MTRRQ9UBK8 725 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 TRANK1O15050 2925 aa16.97■□□□□ 0.31
PMF1-205ENST00000497069 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
PMF1-205ENST00000497069 GTPBP10A4D1E9 387 aaKnown RBP16.96■□□□□ 0.31
PMF1-205ENST00000497069 TACC1O75410 805 aa16.96■□□□□ 0.31
PMF1-205ENST00000497069 OAZ2O95190 189 aa16.96■□□□□ 0.31
PMF1-205ENST00000497069 SERPINC1P01008 464 aa16.96■□□□□ 0.31
PMF1-205ENST00000497069 ADH1AP07327 375 aa16.96■□□□□ 0.31
PMF1-205ENST00000497069 CNPP09543 421 aaKnown RBP16.96■□□□□ 0.31
PMF1-205ENST00000497069 FAM163BP0C2L3 166 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms