RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 CDX2Q99626 313 aaPredicted RBP10.68□□□□□ -0.7
C4A-258ENST00000496659 RAD9AQ99638 391 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 BCO2Q9BYV7 579 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 CXCL16Q9H2A7 254 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 NRDE2Q9H7Z3 1164 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 RC3H2Q9HBD1 1191 aaKnown RBP10.68□□□□□ -0.7
C4A-258ENST00000496659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.7
C4A-258ENST00000496659 ABHD10Q9NUJ1 306 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 GDAP2Q9NXN4 497 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 FAN1Q9Y2M0 1017 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 SNX9Q9Y5X1 595 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 TTC3P53804 2025 aa10.68□□□□□ -0.7
C4A-258ENST00000496659 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 PPEF2O14830 753 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 EPHB6O15197 1021 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 TLL1O43897 1013 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 LRRN2O75325 713 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 TACC1O75410 805 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 TADA2AO75478 443 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 DDHD2O94830 711 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 KIF4AO95239 1232 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 KRT5P13647 590 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 SOX5P35711 763 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 USP8P40818 1118 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
C4A-258ENST00000496659 GATMP50440 423 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 BCAR1P56945 870 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 BPIFB4P59827 614 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 HTRA4P83105 476 aaPredicted RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 DRAP1Q14919 205 aaPredicted RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 RASIP1Q5U651 963 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 VPS36Q86VN1 386 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 ZNF280BQ86YH2 543 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 ADGRF2Q8IZF7 708 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 SHC3Q92529 594 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 TATDN2Q93075 761 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 PANX2Q96RD6 677 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 DNAJC7Q99615 494 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 NAA15Q9BXJ9 866 aaKnown RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 SNX25Q9H3E2 840 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 APOBEC3GQ9HC16 384 aaKnown RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 ADAM28Q9UKQ2 775 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 PRG3Q9Y2Y8 225 aaPredicted RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 PCDHB4Q9Y5E5 795 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 BZW2Q9Y6E2 419 aaKnown RBP10.67□□□□□ -0.7
C4A-258ENST00000496659 TET1Q8NFU7 2136 aa10.67□□□□□ -0.7
C4A-258ENST00000496659 DLL1O00548 723 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 CYB561D2O14569 222 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 NRP1O14786 923 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 CD58P19256 250 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 TYMPP19971 482 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 PBX2P40425 430 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 LHX1P48742 406 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 SLC11A1P49279 550 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 PDE6CP51160 858 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 ADKP55263 362 aaKnown RBP10.66□□□□□ -0.7
C4A-258ENST00000496659 JAM2P57087 298 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 APBA1Q02410 837 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 PTK2Q05397 1052 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 ARID5BQ14865 1188 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
C4A-258ENST00000496659 DPY19L2P1Q6NXN4 242 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 GJB7Q6PEY0 223 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 CCDC186Q7Z3E2 898 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 MYLIPQ8WY64 445 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 BAP1Q92560 729 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 TRIM44Q96DX7 344 aaPredicted RBP10.66□□□□□ -0.7
C4A-258ENST00000496659 TMEM169Q96HH4 297 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 SUSD3Q96L08 255 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 SENP8Q96LD8 212 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 SMYD3Q9H7B4 428 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 CISHQ9NSE2 258 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 CXXC1Q9P0U4 656 aaPredicted RBP10.66□□□□□ -0.7
C4A-258ENST00000496659 DNAJB4Q9UDY4 337 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 BARX2Q9UMQ3 279 aaPredicted RBP10.66□□□□□ -0.7
C4A-258ENST00000496659 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 PCDHB12Q9Y5F1 795 aa10.66□□□□□ -0.7
C4A-258ENST00000496659 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
C4A-258ENST00000496659 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
C4A-258ENST00000496659 M0QZQ0 153 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 SYN3O14994 580 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 SPTLC1O15269 473 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 SERPING1P05155 500 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 GALTP07902 379 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 WARSP23381 471 aaKnown RBP10.65□□□□□ -0.7
C4A-258ENST00000496659 ANXA13P27216 316 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 PCSK1P29120 753 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 HNRNPH3P31942 346 aaKnown RBP10.65□□□□□ -0.7
C4A-258ENST00000496659 KLHL30Q0D2K2 578 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 INCA1Q0VD86 236 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 FUT10Q6P4F1 479 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 TMEM270Q6UE05 265 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 KCNT2Q6UVM3 1135 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 UNC93AQ86WB7 457 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 FAM71AQ8IYT1 594 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 THEM5Q8N1Q8 247 aa10.65□□□□□ -0.7
C4A-258ENST00000496659 TC2NQ8N9U0 490 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms