RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RSRC2Q7L4I2 434 aaKnown RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 DDX53Q86TM3 631 aaKnown RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TMEM35BQ8NCS4 154 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SMG8Q8ND04 991 aaKnown RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SPPL2BQ8TCT7 592 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SLITRK1Q96PX8 696 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SYT15Q9BQS2 421 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ST7Q9NRC1 585 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 RALAP11233 206 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 PROZP22891 400 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 LRPAP1P30533 357 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 EHHADHQ08426 723 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TPGS2Q68CL5 300 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 GPR65Q8IYL9 337 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 HASPINQ8TF76 798 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 RNF139Q8WU17 664 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 FBXL18Q96ME1 805 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 NCAPGQ9BPX3 1015 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ELOVL4Q9GZR5 314 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 DDX43Q9NXZ2 648 aaKnown RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SLC12A6Q9UHW9 1150 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SZT2Q5T011 3432 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 AKR1B15C9JRZ8 316 aaPredicted RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ZNF197O14709 1029 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ABL1P00519 1130 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SLC11A1P49279 550 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 CASP4P49662 377 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 MYL6P60660 151 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ARID5AQ03989 594 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ZACNQ401N2 412 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 UBXN11Q5T124 520 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SPECC1LQ69YQ0 1117 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TMEM270Q6UE05 265 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 KIAA1328Q86T90 577 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TRIM59Q8IWR1 403 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 SEPT5Q99719 369 aaPredicted RBP9.2□□□□□ -0.94
U2AF1-212ENST00000496462 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 ZNF576Q9H609 170 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 IGFLR1Q9H665 355 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 CYP4F11Q9HBI6 524 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 PTPRHQ9HD43 1115 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 NLRC4Q9NPP4 1024 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 DMAC2Q9NW81 257 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 STRIP2Q9ULQ0 834 aa9.2□□□□□ -0.94
U2AF1-212ENST00000496462 A0A1W2PQC6 194 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 LRRIQ3A6PVS8 624 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 FAM200BP0CF97 657 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 FOSL2P15408 326 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 ACADSBP45954 432 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 CUL2Q13617 745 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 YAF2Q8IY57 180 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 SUSD3Q96L08 255 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 HERC2P3Q9BVR0 1158 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 NSUN3Q9H649 340 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 CEP72Q9P209 647 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 ZMYM5Q9UJ78 669 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 BARX2Q9UMQ3 279 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 TYW5A2RUC4 315 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 NT5C1B-RDH14C9J2C7 533 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 ZBTB24O43167 697 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 VDRP11473 427 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 NSFP46459 744 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 RABGGTBP53611 331 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 PABPC1LQ4VXU2 614 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 ATAT1Q5SQI0 421 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 MRPS31Q92665 395 aaKnown RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 RNF34Q969K3 372 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 LRIT3Q3SXY7 679 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 TOGARAM2Q6ZUX3 1019 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 RTL10Q7L3V2 364 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 LEMD2Q8NC56 503 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 PLEKHA4Q9H4M7 779 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 CERS4Q9HA82 394 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-212ENST00000496462 MYO6Q9UM54 1294 aa9.19□□□□□ -0.94
U2AF1-212ENST00000496462 LAMA2P24043 3122 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 TMEM189-UBE2V1I3L0A0 370 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 TRIM66O15016 1216 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 MGEA5O60502 916 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 RTN3O95197 1032 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 KRT83P78385 493 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 GCNT1Q02742 428 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 HIC1Q14526 733 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 FAM109BQ6ICB4 259 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 OR8K1Q8NGG5 319 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ACSF2Q96CM8 615 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms