RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TPM2P07951 284 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 FMO5P49326 533 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 MYL7Q01449 175 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 WDR72Q3MJ13 1102 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 PPFIBP1Q86W92 1011 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 IRF2BP1Q8IU81 584 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 THEM5Q8N1Q8 247 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 TMEM86AQ8N2M4 240 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 AOPEPQ8N6M6 819 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 TOP6BLQ8N6T0 577 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
HDAC6-235ENST00000495515 SPATA18Q8TC71 538 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 TAS1R2Q8TE23 839 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 SAMSN1Q9NSI8 373 aaKnown RBP18.37■□□□□ 0.53
HDAC6-235ENST00000495515 RAB20Q9NX57 234 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 BACE2Q9Y5Z0 518 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 COL6A3P12111 3177 aa18.37■□□□□ 0.53
HDAC6-235ENST00000495515 OAZ2O95190 189 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CYP11A1P05108 521 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 FAM163BP0C2L3 166 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
HDAC6-235ENST00000495515 KLRC2P26717 231 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 NDUFV1P49821 464 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 COL4A4P53420 1690 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-235ENST00000495515 TPM4P67936 248 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CTXN3Q4LDR2 81 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CBWD6Q4V339 395 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 TCP11X2Q5H9J9 407 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CBWD3Q5JTY5 395 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 CBWD5Q5RIA9 395 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 OVOS1Q6IE37 1185 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 PRSS55Q6UWB4 352 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-235ENST00000495515 KLHL5Q96PQ7 755 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 MMS19Q96T76 1030 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 XYLT2Q9H1B5 865 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 FANCLQ9NW38 375 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 MTRRQ9UBK8 725 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 COQ4Q9Y3A0 265 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
HDAC6-235ENST00000495515 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 CNPP09543 421 aaKnown RBP18.35■□□□□ 0.53
HDAC6-235ENST00000495515 SRGAP2BP0DMP2 458 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 NRIP1P48552 1158 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 MRPL58Q14197 206 aaKnown RBP18.35■□□□□ 0.53
HDAC6-235ENST00000495515 DUSP6Q16828 381 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 HSP90AA4PQ58FG1 418 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 RBM23Q86U06 439 aaKnown RBP18.35■□□□□ 0.53
HDAC6-235ENST00000495515 TUBGCP2Q9BSJ2 902 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 NXF1Q9UBU9 619 aaKnown RBP18.35■□□□□ 0.53
HDAC6-235ENST00000495515 TIMM13Q9Y5L4 95 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-235ENST00000495515 PLXNA4Q9HCM2 1894 aa18.35■□□□□ 0.53
HDAC6-235ENST00000495515 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 TEX28O15482 410 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 C1RP00736 705 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 LHX1P48742 406 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 NOP14P78316 857 aaKnown RBP18.34■□□□□ 0.53
HDAC6-235ENST00000495515 WSCD1Q658N2 575 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 ELMSAN1Q6PJG2 1045 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 ADGRF2Q8IZF7 708 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 PDCL2Q8N4E4 241 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 FAXDC2Q96IV6 333 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 DPP7Q9UHL4 492 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 L1RE1Q9UN81 338 aa18.34■□□□□ 0.53
HDAC6-235ENST00000495515 PES1O00541 588 aaKnown RBP18.33■□□□□ 0.52
HDAC6-235ENST00000495515 PER2O15055 1255 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 CLASP2O75122 1294 aaKnown RBP18.33■□□□□ 0.52
HDAC6-235ENST00000495515 TACC1O75410 805 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 NCAPHQ15003 741 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 SOWAHAQ2M3V2 549 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 VWA3BQ502W6 1294 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 SLC8B1Q6J4K2 584 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 DHX40Q8IX18 779 aaKnown RBP18.33■□□□□ 0.52
HDAC6-235ENST00000495515 EFHBQ8N7U6 833 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 FAM200AQ8TCP9 573 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 CLSTN3Q9BQT9 956 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 FBXL5Q9UKA1 691 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 CDY1Q9Y6F8 540 aa18.33■□□□□ 0.52
HDAC6-235ENST00000495515 GTPBP10A4D1E9 387 aaKnown RBP18.32■□□□□ 0.52
HDAC6-235ENST00000495515 GOLGA6L19H0YKK7 550 aa18.32■□□□□ 0.52
HDAC6-235ENST00000495515 GLUD1P00367 558 aa18.32■□□□□ 0.52
HDAC6-235ENST00000495515 RPL17P18621 184 aaKnown RBP18.32■□□□□ 0.52
HDAC6-235ENST00000495515 PCSK1P29120 753 aa18.32■□□□□ 0.52
HDAC6-235ENST00000495515 OR1D2P34982 312 aa18.32■□□□□ 0.52
HDAC6-235ENST00000495515 HYAL1Q12794 435 aa18.32■□□□□ 0.52
HDAC6-235ENST00000495515 RAB33AQ14088 237 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms