RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 GAREM2Q75VX8 874 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 HEATR3Q7Z4Q2 680 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 C11orf74Q86VG3 221 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 SLC41A1Q8IVJ1 513 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 BPIFB1Q8TDL5 484 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 PRPF31Q8WWY3 499 aaKnown RBP9.88□□□□□ -0.83
GARNL3-219ENST00000495172 P2RY13Q9BPV8 354 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
GARNL3-219ENST00000495172 TCEAL9Q9UHQ7 104 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 GIT1Q9Y2X7 761 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 TAF6LQ9Y6J9 622 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 TLN1Q9Y490 2541 aaKnown RBP9.88□□□□□ -0.83
GARNL3-219ENST00000495172 PLXND1Q9Y4D7 1925 aa9.88□□□□□ -0.83
GARNL3-219ENST00000495172 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 IFIT3O14879 490 aaKnown RBP9.87□□□□□ -0.83
GARNL3-219ENST00000495172 SOAT2O75908 522 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 ATF2P15336 505 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 CR2P20023 1033 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 MAOBP27338 520 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 DNM2P50570 870 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 GRIK2Q13002 908 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 PLEKHG6Q3KR16 790 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 ZNF574Q6ZN55 896 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-219ENST00000495172 TCEAL8Q8IYN2 117 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 BAHD1Q8TBE0 780 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-219ENST00000495172 HMGB4Q8WW32 186 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 E2F7Q96AV8 911 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 FAM83CQ9BQN1 747 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 SPZ1Q9BXG8 430 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 DNAJC25Q9H1X3 360 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 DISC1Q9NRI5 854 aa9.87□□□□□ -0.83
GARNL3-219ENST00000495172 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.87□□□□□ -0.83
GARNL3-219ENST00000495172 TRIP11Q15643 1979 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 TRIM66O15016 1216 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 VNN2O95498 520 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 DRD1P21728 446 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 GJA4P35212 333 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 SREBF1P36956 1147 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 NPEPPSP55786 919 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 RPL6Q02878 288 aaKnown RBP9.86□□□□□ -0.83
GARNL3-219ENST00000495172 LAMTOR4Q0VGL1 99 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
GARNL3-219ENST00000495172 GLRA4Q5JXX5 417 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 SMAP1Q8IYB5 467 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-219ENST00000495172 ELMOD1Q8N336 334 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 GALNT15Q8N3T1 639 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 CNNM3Q8NE01 707 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 TTC16Q8NEE8 873 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 USP33Q8TEY7 942 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 ACDQ96AP0 544 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 MED8Q96G25 268 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 TRIM6Q9C030 488 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-219ENST00000495172 KRT23Q9C075 422 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 ATXN3LQ9H3M9 355 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 CD93Q9NPY3 652 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 FNDC3AQ9Y2H6 1198 aaKnown RBP9.86□□□□□ -0.83
GARNL3-219ENST00000495172 USP20Q9Y2K6 914 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 BACE2Q9Y5Z0 518 aa9.86□□□□□ -0.83
GARNL3-219ENST00000495172 ZNF638Q14966 1978 aaKnown RBP9.85□□□□□ -0.83
GARNL3-219ENST00000495172 WDR64B1ANS9 1081 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 B3GAT3O94766 335 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 ERLIN2O94905 339 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CALM1P0DP23 149 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CALM2P0DP24 149 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CALM3P0DP25 149 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 ARF4P18085 180 aaPredicted RBP9.85□□□□□ -0.83
GARNL3-219ENST00000495172 MX1P20591 662 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 MCM2P49736 904 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CLCNKBP51801 687 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 RHDQ02161 417 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 ZNF33AQ06730 810 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CRY1Q16526 586 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 AMHR2Q16671 573 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 JAKMIP3Q5VZ66 844 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 WWC2Q6AWC2 1192 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 SLC8B1Q6J4K2 584 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 RTL10Q7L3V2 364 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 TMEM130Q8N3G9 435 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 TTC9BQ8N6N2 239 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 CEP76Q8TAP6 659 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 RHBDD1Q8TEB9 315 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 NXPE2Q96DL1 559 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 SPACA7Q96KW9 195 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 PGLYRP2Q96PD5 576 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 LPIN3Q9BQK8 851 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 NIFKQ9BYG3 293 aaKnown RBP9.85□□□□□ -0.83
GARNL3-219ENST00000495172 BCCIPQ9P287 314 aaKnown RBP eCLIP9.85□□□□□ -0.83
GARNL3-219ENST00000495172 YIPF1Q9Y548 306 aa9.85□□□□□ -0.83
GARNL3-219ENST00000495172 HEMK1Q9Y5R4 338 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms