RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 A0A1W2PPM1 405 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 RNF8O76064 485 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 CXCL8P10145 99 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 RARGP13631 454 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 TCF7P36402 384 aaPredicted RBP14.21□□□□□ -0.14
GPC1-209ENST00000495100 IL9RQ01113 521 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 SP2Q02086 613 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 SLC39A4Q6P5W5 647 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 C3orf62Q6ZUJ4 267 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 FUKQ8N0W3 1084 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 GRK7Q8WTQ7 553 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 PRM3Q9NNZ6 103 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 METTL5Q9NRN9 209 aaKnown RBP14.21□□□□□ -0.14
GPC1-209ENST00000495100 PCDHA3Q9Y5H8 950 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 UBE4BO95155 1302 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 BCORQ6W2J9 1755 aa14.21□□□□□ -0.14
GPC1-209ENST00000495100 A0A0A6YYK5 440 aaPredicted RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 PIK3CDO00329 1044 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 KRT3P12035 628 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 CDH6P55285 790 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TMEM132BQ14DG7 1078 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 AGBL2Q5U5Z8 902 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 LMO3Q8TAP4 145 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 MBOAT7Q96N66 472 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 ACAD9Q9H845 621 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 DMAC2Q9NW81 257 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 NOCTQ9UK39 431 aaKnown RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 TNRC6CQ9HCJ0 1690 aaKnown RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 NEBLO76041 1014 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TNNC2P02585 160 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 APRTP07741 180 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 MSH2P43246 934 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TFDP1Q14186 410 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 MAPK6Q16659 721 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 HACE1Q8IYU2 909 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 ACTL9Q8TC94 416 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 NLRP7Q8WX94 980 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 CRYGNQ8WXF5 182 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TEX13BQ9BXU2 312 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 SLC38A10Q9HBR0 1119 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 APOBEC3GQ9HC16 384 aaKnown RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 ACSS2Q9NR19 701 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 INPP5FQ9Y2H2 1132 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 CHUKO15111 745 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 VTNP04004 478 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 CD48P09326 243 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 SLFN11Q7Z7L1 901 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 ZBTB8OSQ8IWT0 167 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 TRIM56Q9BRZ2 755 aaKnown RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 XPNPEP1Q9NQW7 623 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 CISHQ9NSE2 258 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 ZDHHC18Q9NUE0 388 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 UVRAGQ9P2Y5 699 aa14.2□□□□□ -0.14
GPC1-209ENST00000495100 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
GPC1-209ENST00000495100 PLIN4Q96Q06 1357 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 TTC4O95801 387 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 BAG2O95816 211 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 AGTP01019 485 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 BACE1P56817 501 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 GTF2BQ00403 316 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 BMPR2Q13873 1038 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ARHGEF18Q6ZSZ5 1173 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 RASGEF1CQ8N431 466 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 DCLK3Q9C098 648 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 NOD2Q9HC29 1040 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 NRBP2Q9NSY0 501 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 SPATA31A6Q5VVP1 1343 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 CETPP11597 493 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 HSPA6P17066 643 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ATP5DP30049 168 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 SFNP31947 248 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 RFC1P35251 1148 aaPredicted RBP14.19□□□□□ -0.14
GPC1-209ENST00000495100 PTGIRP43119 386 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 BPIFB4P59827 614 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 OTUD4Q01804 1114 aaKnown RBP14.19□□□□□ -0.14
GPC1-209ENST00000495100 LRRC36Q1X8D7 754 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ERMARDQ5T6L9 678 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 LVRNQ6Q4G3 990 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 KDELC2Q7Z4H8 507 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 CCNYQ8ND76 341 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 SPATA33Q96N06 139 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 TRIM6Q9C030 488 aaPredicted RBP14.19□□□□□ -0.14
GPC1-209ENST00000495100 R3HDMLQ9H3Y0 253 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 PLCH1Q4KWH8 1693 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ITGB3P05106 788 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 MAN1A1P33908 653 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ATXN3P54252 364 aaPredicted RBP14.19□□□□□ -0.14
GPC1-209ENST00000495100 MPP2Q14168 576 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 CNGA2Q16280 664 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 XKR3Q5GH77 459 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 ANKRD20A3Q5VUR7 823 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 C4orf19Q8IY42 314 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms