RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 POU6F2P78424 691 aaPredicted RBP5.39□□□□□ -1.55
VPS50-219ENST00000495039 PLAC9Q5JTB6 97 aa5.39□□□□□ -1.55
VPS50-219ENST00000495039 TMPRSS9Q7Z410 1059 aa5.39□□□□□ -1.55
VPS50-219ENST00000495039 STRA8Q7Z7C7 330 aa5.39□□□□□ -1.55
VPS50-219ENST00000495039 JAZF1Q86VZ6 243 aa5.39□□□□□ -1.55
VPS50-219ENST00000495039 NSUN7Q8NE18 718 aaKnown RBP5.39□□□□□ -1.55
VPS50-219ENST00000495039 AHCYL2Q96HN2 611 aaKnown RBP5.39□□□□□ -1.55
VPS50-219ENST00000495039 SERGEFQ9UGK8 458 aa5.39□□□□□ -1.55
VPS50-219ENST00000495039 EBLN1P0CF75 366 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 NR2F6P10588 404 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 CRELD2Q6UXH1 353 aaPredicted RBP5.38□□□□□ -1.55
VPS50-219ENST00000495039 ZNF365Q70YC5 407 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 YTHDF3Q7Z739 585 aaKnown RBP5.38□□□□□ -1.55
VPS50-219ENST00000495039 RSPH3Q86UC2 560 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 AOPEPQ8N6M6 819 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 IL17RDQ8NFM7 739 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 DPF2Q92785 391 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 RFKQ969G6 155 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 TMX3Q96JJ7 454 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 IMPG2Q9BZV3 1241 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 TDP1Q9NUW8 608 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 GPR45Q9Y5Y3 372 aa5.38□□□□□ -1.55
VPS50-219ENST00000495039 A0A0B4J269 797 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 SLC43A1O75387 559 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 RHOP08100 348 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 SBK3P0C264 359 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 CBSLP0DN79 551 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 CBSP35520 551 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
VPS50-219ENST00000495039 TUBB3Q13509 450 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 FHL1Q13642 323 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.37□□□□□ -1.55
VPS50-219ENST00000495039 TAPT1Q6NXT6 567 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 CEP85Q6P2H3 762 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 ZNF66Q6ZN08 573 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-219ENST00000495039 WACQ9BTA9 647 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 INTUQ9ULD6 942 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 PCDHB1Q9Y5F3 818 aa5.37□□□□□ -1.55
VPS50-219ENST00000495039 MPGP29372 298 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 SOX5P35711 763 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 TMPRSS15P98073 1019 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 CDC42EP1Q00587 391 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 TARDBPQ13148 414 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS50-219ENST00000495039 ZNF517Q6ZMY9 492 aaPredicted RBP5.36□□□□□ -1.55
VPS50-219ENST00000495039 MIGA2Q7L4E1 593 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 FAM9AQ8IZU1 332 aaPredicted RBP5.36□□□□□ -1.55
VPS50-219ENST00000495039 UBR7Q8N806 425 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 TMIEQ8NEW7 156 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 NRG4Q8WWG1 115 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 FKBP10Q96AY3 582 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 RGMAQ96B86 450 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 LRIG1Q96JA1 1093 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 TRIB1Q96RU8 372 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 SMOQ99835 787 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 TPSD1Q9BZJ3 242 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 CAAP1Q9H8G2 361 aa5.36□□□□□ -1.55
VPS50-219ENST00000495039 SPATA31A3Q5VYP0 1347 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 PPP6CO00743 305 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 ENPP3O14638 875 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 PPEF2O14830 753 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 TRIAP1O43715 76 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 JTBO76095 146 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 ZFXP17010 805 aaPredicted RBP5.35□□□□□ -1.55
VPS50-219ENST00000495039 AGXTP21549 392 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 WASP42768 502 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 FOXG1P55316 489 aaPredicted RBP5.35□□□□□ -1.55
VPS50-219ENST00000495039 STAT4Q14765 748 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 PROSER3Q2NL68 480 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 FLYWCH1Q4VC44 716 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 KLHL22Q53GT1 634 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 SLC18B1Q6NT16 456 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 TECPR1Q7Z6L1 1165 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 SLC17A8Q8NDX2 589 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 IFI44Q8TCB0 444 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 SLC2A13Q96QE2 648 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 ANLNQ9NQW6 1124 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 ZNF277Q9NRM2 450 aaPredicted RBP5.35□□□□□ -1.55
VPS50-219ENST00000495039 SERTAD4Q9NUC0 356 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 SAP30BPQ9UHR5 308 aaKnown RBP5.35□□□□□ -1.55
VPS50-219ENST00000495039 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS50-219ENST00000495039 KAT6AQ92794 2004 aa5.35□□□□□ -1.55
VPS50-219ENST00000495039 F5H697 171 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 NTN1O95631 604 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 ANXA1P04083 346 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 GYS2P54840 703 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 BMPR2Q13873 1038 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 ZNF551Q7Z340 670 aaPredicted RBP5.34□□□□□ -1.55
VPS50-219ENST00000495039 POC1BQ8TC44 478 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 RAB24Q969Q5 203 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 OSBPL9Q96SU4 736 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 KRTAP2-2Q9BYT5 123 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 SH3BP4Q9P0V3 963 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 SLC45A2Q9UMX9 530 aa5.34□□□□□ -1.55
VPS50-219ENST00000495039 NXPH3O95157 252 aa5.33□□□□□ -1.56
VPS50-219ENST00000495039 CYP2D6P10635 497 aa5.33□□□□□ -1.56
VPS50-219ENST00000495039 NDUFB7P17568 137 aa5.33□□□□□ -1.56
VPS50-219ENST00000495039 NDUFV1P49821 464 aa5.33□□□□□ -1.56
VPS50-219ENST00000495039 POLGP54098 1239 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms