RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 OXCT2Q9BYC2 517 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 MRPL46Q9H2W6 279 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.41□□□□□ -1.38
PHC3-214ENST00000494943 ITM2BQ9Y287 266 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NID2Q14112 1375 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PLEKHG3A1L390 1219 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NOTOA8MTQ0 251 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CSDE1O75534 798 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 KRT7P08729 469 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 RAG1P15918 1043 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CIITAP33076 1130 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 INHBEP58166 350 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 KDSRQ06136 332 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PSMD6Q15008 389 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PFKFB3Q16875 520 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 MPRIPQ6WCQ1 1025 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 HAUS6Q7Z4H7 955 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ZNF354CQ86Y25 554 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CCNJLQ8IV13 435 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NUDCD3Q8IVD9 361 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ZNF75CPQ92670 426 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 TRIM9Q9C026 710 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 EPS8L2Q9H6S3 715 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TMEM59LQ9UK28 342 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 SIK3Q9Y2K2 1263 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NR2E3Q9Y5X4 410 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 MROH5Q6ZUA9 1318 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 MAP3K13O43283 966 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TOM1O60784 492 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CBX6O95503 412 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 VCLP18206 1134 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NFKBIAP25963 317 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ALCAMQ13740 583 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 DDB1Q16531 1140 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 SCARA3Q6AZY7 606 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 SDR16C5Q8N3Y7 309 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NEDD1Q8NHV4 660 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 GABPB2Q8TAK5 448 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 SPIRE2Q8WWL2 714 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 GATA6Q92908 595 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NSMCE3Q96MG7 304 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PRPF18Q99633 342 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 ZBED2Q9BTP6 218 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TRNAU1APQ9NX07 287 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 SEL1LQ9UBV2 794 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PRKAG3Q9UGI9 489 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 H0Y626 953 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 PDE6AP16499 860 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TAC1P20366 129 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 IL10P22301 178 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 EEF1B2P24534 225 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 PRDX6P30041 224 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TXKP42681 527 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 KPNA2P52292 529 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 ITGA8P53708 1063 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ATN1P54259 1190 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 ANTXR2P58335 489 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 BTKQ06187 659 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 SUZ12Q15022 739 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 ZNF829Q3KNS6 432 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 TTC39BQ5VTQ0 682 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 TPTE2Q6XPS3 522 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 SATL1Q86VE3 508 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 SLC13A5Q86YT5 568 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 SNX31Q8N9S9 440 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 FBXO25Q8TCJ0 367 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 CCDC124Q96CT7 223 aaKnown RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 SGF29Q96ES7 293 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 TTYH3Q9C0H2 523 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ARHGEF10LQ9HCE6 1279 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 ARPP21Q9UBL0 812 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 FBXO9Q9UK97 447 aaPredicted RBP6.41□□□□□ -1.38
PHC3-214ENST00000494943 TFR2Q9UP52 801 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 NAALADL1Q9UQQ1 740 aa6.41□□□□□ -1.38
PHC3-214ENST00000494943 WDR91A4D1P6 747 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 RCCD1A6NED2 376 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 SNTNA6NMZ2 147 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 KIAA0391O15091 583 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 TSPY3P0CV98 308 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 TSPY8P0CW00 308 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 NCF2P19878 526 aaPredicted RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 TKTP29401 623 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 STIP1P31948 543 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 FDFT1P37268 417 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 ALDH18A1P54886 795 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 KCNH2Q12809 1159 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 FLOT2Q14254 428 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 ZNF618Q5T7W0 954 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 APTXQ7Z2E3 356 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 PDSS2Q86YH6 399 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 CLVS1Q8IUQ0 354 aaPredicted RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 REXO1Q8N1G1 1221 aaKnown RBP6.4□□□□□ -1.38
PHC3-214ENST00000494943 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 FAM172AQ8WUF8 416 aa6.4□□□□□ -1.38
PHC3-214ENST00000494943 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms