RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PAGE5Q96GU1 130 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 ZNF560Q96MR9 790 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 CORO1BQ9BR76 489 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 HSPBP1Q9NZL4 362 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 DSEQ9UL01 958 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 NUMBLQ9Y6R0 609 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 UBE4BO95155 1302 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 ITGB3P05106 788 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 CYP11A1P05108 521 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 POLR2BP30876 1174 aaKnown RBP35.85■■■■□ 3.33
CBX4-203ENST00000494546 TWF1Q12792 350 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 GPR17Q13304 367 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 MYBPC2Q14324 1141 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 SV2CQ496J9 727 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 METTL23Q86XA0 190 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 ELMOD1Q8N336 334 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 FAM122AQ96E09 287 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 TMEM209Q96SK2 561 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 FBXL21Q9UKT6 434 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 AGAP1Q9UPQ3 857 aa35.85■■■■□ 3.33
CBX4-203ENST00000494546 ZNF233A6NK53 670 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 KPNA7A9QM74 516 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 ANHXE9PGG2 379 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 TGFB1I1O43294 461 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 CBWD2Q8IUF1 395 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 C1orf127Q8N9H9 656 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 SCAND2PQ9GZW5 306 aaPredicted RBP35.84■■■■□ 3.33
CBX4-203ENST00000494546 AGPAT3Q9NRZ7 376 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 SCN1AP35498 2009 aa35.84■■■■□ 3.33
CBX4-203ENST00000494546 PNPLA4P41247 253 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 VCPP55072 806 aaKnown RBP35.83■■■■□ 3.33
CBX4-203ENST00000494546 SLC5A9Q2M3M2 681 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 NPAS3Q8IXF0 933 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 CSGALNACT2Q8N6G5 542 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 BORCS6Q96GS4 357 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 ZNF512Q96ME7 567 aaPredicted RBP35.83■■■■□ 3.33
CBX4-203ENST00000494546 MFSD1Q9H3U5 465 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 USP25Q9UHP3 1055 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 HPSEQ9Y251 543 aa35.83■■■■□ 3.33
CBX4-203ENST00000494546 CLIC2O15247 247 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 VNN2O95498 520 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 TMEM191BP0C7N4 346 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 PLA2G5P39877 138 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 DUSP4Q13115 394 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 WSCD1Q658N2 575 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 LMBRD2Q68DH5 695 aaPredicted RBP35.82■■■■□ 3.32
CBX4-203ENST00000494546 IQCEQ6IPM2 695 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 PARM1Q6UWI2 310 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 OR10T2Q8NGX3 314 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 FGF14Q92915 247 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 MTMR12Q9C0I1 747 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 AVENQ9NQS1 362 aaPredicted RBP35.82■■■■□ 3.32
CBX4-203ENST00000494546 YIPF1Q9Y548 306 aa35.82■■■■□ 3.32
CBX4-203ENST00000494546 CFHP08603 1231 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 KRT19P08727 400 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 HS2ST1Q7LGA3 356 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 THEM5Q8N1Q8 247 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 RPP25Q9BUL9 199 aaKnown RBP35.81■■■■□ 3.32
CBX4-203ENST00000494546 KCNH6Q9H252 994 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 CRISPLD1Q9H336 500 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 KIAA1586Q9HCI6 787 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 EXOC1Q9NV70 894 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 CEP72Q9P209 647 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 ITGA11Q9UKX5 1188 aa35.81■■■■□ 3.32
CBX4-203ENST00000494546 NOTCH4Q99466 2003 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 MTMR11A4FU01 709 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 AVPR2P30518 371 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 SYKP43405 635 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 CYP2J2P51589 502 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 SURF1Q15526 300 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 IER5LQ5T953 404 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 SCARA3Q6AZY7 606 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 MTSS1LQ765P7 747 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 RDH13Q8NBN7 331 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 ATAD1Q8NBU5 361 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 MCRS1Q96EZ8 462 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 ANKRD36BP1Q96IX9 119 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 SLC27A5Q9Y2P5 690 aa35.8■■■■□ 3.32
CBX4-203ENST00000494546 TSC2P49815 1807 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 KLRC4O43908 158 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 SRFP11831 508 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 CEBPBP17676 345 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 NDUFA8P51970 172 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 BFSP1Q12934 665 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 BMT2Q1RMZ1 405 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 CYP4A22Q5TCH4 519 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 CENPPQ6IPU0 288 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 PDZD4Q76G19 769 aaPredicted RBP35.79■■■■□ 3.32
CBX4-203ENST00000494546 HS6ST3Q8IZP7 471 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 TCEAL4Q96EI5 215 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 GDPD2Q9HCC8 539 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 INTS13Q9NVM9 706 aa35.79■■■■□ 3.32
CBX4-203ENST00000494546 CDR1P51861 262 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 SNRPFP62306 86 aaKnown RBP35.78■■■■□ 3.32
CBX4-203ENST00000494546 RBP5P82980 135 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 PLD1Q13393 1074 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 SNRNP35Q16560 246 aaKnown RBP35.78■■■■□ 3.32
CBX4-203ENST00000494546 KNOP1Q1ED39 458 aaKnown RBP35.78■■■■□ 3.32
CBX4-203ENST00000494546 KMT5BQ4FZB7 885 aa35.78■■■■□ 3.32
CBX4-203ENST00000494546 SLC39A12Q504Y0 691 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms