RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PAHP00439 452 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 TIMP1P01033 207 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 PRLRP16471 622 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 NFKBIAP25963 317 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 CDC25AP30304 524 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
BRCA1-222ENST00000493919 THPOP40225 353 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 MXI1P50539 228 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 MTTPP55157 894 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 GEMIN4P57678 1058 aaKnown RBP12.31□□□□□ -0.44
BRCA1-222ENST00000493919 STK38Q15208 465 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 ZNF484Q5JVG2 852 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
BRCA1-222ENST00000493919 SDE2Q6IQ49 451 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 EXOC3L1Q86VI1 746 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 IGSF22Q8N9C0 903 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 SCAIQ8N9R8 606 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 CAGE1Q8TC20 777 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 ZNF711Q9Y462 761 aa12.31□□□□□ -0.44
BRCA1-222ENST00000493919 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 KLRC1P26715 233 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 POLD2P49005 469 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 ADAM17P78536 824 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 PLOD1Q02809 727 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-222ENST00000493919 KLC1Q07866 573 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 SPCS2Q15005 226 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 KRT79Q5XKE5 535 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 TAF2Q6P1X5 1199 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 ANO5Q75V66 913 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 C4orf19Q8IY42 314 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
BRCA1-222ENST00000493919 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-222ENST00000493919 DNAJB3Q8WWF6 145 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 GIMAP5Q96F15 307 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 MAELQ96JY0 434 aaKnown RBP12.3□□□□□ -0.44
BRCA1-222ENST00000493919 WNT8AQ9H1J5 351 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 KIAA1257Q9ULG3 409 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
BRCA1-222ENST00000493919 A0A087WWV3 80 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 ZBTB39O15060 712 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 MAP3K7O43318 606 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SEC31AO94979 1220 aaKnown RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 C22orf31O95567 290 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CKBP12277 381 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 NPEPPSP55786 919 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TUBB4BP68371 445 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 GRIN1Q05586 938 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 PTPAQ15257 358 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 C15orf59Q2T9L4 293 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 PRPF38BQ5VTL8 546 aaKnown RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 FAM20CQ8IXL6 584 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 LRRC71Q8N4P6 559 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 NSMCE1Q8WV22 266 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 MOGAT1Q96PD6 335 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 NDNQ99608 321 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 HSD17B14Q9BPX1 270 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 ZDHHC9Q9Y397 364 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 BIN1O00499 593 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TADA3O75528 432 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CSF2RAP15509 400 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SELPP16109 830 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 RPA1P27694 616 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CCT5P48643 541 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TUFMP49411 452 aaKnown RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CLCN3P51790 818 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 FPGSQ05932 587 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SP140Q13342 867 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 ZNF618Q5T7W0 954 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CHAMP1Q96JM3 812 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SUGCTQ9HAC7 445 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms