RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RNF168Q8IYW5 571 aaPredicted RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 MRPL43Q8N983 215 aaKnown RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 TMEM174Q8WUU8 243 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 EEF2KMTQ96G04 330 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 DACH1Q9UI36 760 aa12.5□□□□□ -0.41
CTSA-209ENST00000493522 R3HCC1Q9Y3T6 440 aaKnown RBP12.5□□□□□ -0.41
CTSA-209ENST00000493522 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 C2orf71A6NGG8 1288 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 LRRIQ3A6PVS8 624 aaPredicted RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 MAPK13O15264 365 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 SLC16A3O15427 465 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 CXCL14O95715 111 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 MTHFRP42898 656 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 TAF6P49848 677 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 FKBP3Q00688 224 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 BFSP1Q12934 665 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 BIRC3Q13489 604 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 CD300LGQ6UXG3 332 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 INTS8Q75QN2 995 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 USP37Q86T82 979 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 C1orf127Q8N9H9 656 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 MLKLQ8NB16 471 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 RIN2Q8WYP3 895 aaPredicted RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 MKNK1Q9BUB5 465 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 POMKQ9H5K3 350 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 MRPL17Q9NRX2 175 aaKnown RBP12.49□□□□□ -0.41
CTSA-209ENST00000493522 DZANK1Q9NVP4 752 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 MYH10P35580 1976 aa12.49□□□□□ -0.41
CTSA-209ENST00000493522 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 H0Y858 1186 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PIRO00625 290 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 PHACTR2O75167 634 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 EFEMP2O95967 443 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PDGFBP01127 241 aaPredicted RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 VAMP7P51809 220 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 DLG4P78352 724 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 DSG1Q02413 1049 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PSMD5Q16401 504 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 STX1AQ16623 288 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 KLHL40Q2TBA0 621 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 SV2CQ496J9 727 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 DCAF17Q5H9S7 520 aaPredicted RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 RTP2Q5QGT7 225 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PRSS55Q6UWB4 352 aaPredicted RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 TDRD5Q8NAT2 981 aaKnown RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PARD3BQ8TEW8 1205 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 TTPALQ9BTX7 342 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
CTSA-209ENST00000493522 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 SSX2IPQ9Y2D8 614 aa12.48□□□□□ -0.41
CTSA-209ENST00000493522 PTPRDP23468 1912 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 SYN3O14994 580 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
CTSA-209ENST00000493522 ODC1P11926 461 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 FGFR3P22607 806 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 PNPLA4P41247 253 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 AP3M2P53677 418 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 LILRA4P59901 499 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 RBP5P82980 135 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 CREMQ03060 361 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 TRPC3Q13507 836 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
CTSA-209ENST00000493522 TCERG1LQ5VWI1 586 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 FOXR2Q6PJQ5 311 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 TRAPPC11Q7Z392 1133 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 EMILIN2Q9BXX0 1053 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 MFSD1Q9H3U5 465 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 SIX4Q9UIU6 781 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms