RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TRAPPC10P48553 1259 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 AARSP49588 968 aaKnown RBP eCLIP19.25■□□□□ 0.67
NUP50-218ENST00000493456 GPR17Q13304 367 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 PDIA5Q14554 519 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 C12orf50Q8NA57 414 aaPredicted RBP19.25■□□□□ 0.67
NUP50-218ENST00000493456 SNX29Q8TEQ0 813 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 PGLYRP2Q96PD5 576 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 TIPINQ9BVW5 301 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 PLEKHA5Q9HAU0 1116 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 ANKFY1Q9P2R3 1169 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 KCNG1Q9UIX4 513 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 GREB1Q4ZG55 1949 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 OR4Q2P0C623 313 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 ZNF806P0C7X5 589 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 WEE1P30291 646 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 SHC2P98077 582 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 DUSP4Q13115 394 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 MAPK7Q13164 816 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 MYBPC2Q14324 1141 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 PON2Q15165 354 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 ARHGAP15Q53QZ3 475 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 STXBP5Q5T5C0 1151 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 ITIH5Q86UX2 942 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 ZBTB45Q96K62 511 aaPredicted RBP19.24■□□□□ 0.67
NUP50-218ENST00000493456 MKNK1Q9BUB5 465 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 CRISPLD1Q9H336 500 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 ATXN3LQ9H3M9 355 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 C2orf42Q9NWW7 574 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 GTSE1Q9NYZ3 720 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 HSFX1Q9UBD0 423 aa19.24■□□□□ 0.67
NUP50-218ENST00000493456 CCDC163A0A0D9SF12 145 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 SLC16A4O15374 487 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 ZZEF1O43149 2961 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 EPN2O95208 641 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 CYP3A5P20815 502 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 MCL1Q07820 350 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 PTPAQ15257 358 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 CENPPQ6IPU0 288 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 ZPBP2Q6X784 338 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 GAREM2Q75VX8 874 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 CACNA2D4Q7Z3S7 1137 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 C4orf32Q8N8J7 132 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 IGSF22Q8N9C0 903 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 GAB3Q8WWW8 586 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 ZFYVE19Q96K21 471 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 C8orf76Q96K31 380 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 LRRC3BQ96PB8 259 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 NTPCRQ9BSD7 190 aaKnown RBP19.23■□□□□ 0.67
NUP50-218ENST00000493456 RUSC1Q9BVN2 902 aa19.23■□□□□ 0.67
NUP50-218ENST00000493456 UBQLN1Q9UMX0 589 aaKnown RBP19.23■□□□□ 0.67
NUP50-218ENST00000493456 TIMM13Q9Y5L4 95 aaPredicted RBP19.23■□□□□ 0.67
NUP50-218ENST00000493456 CNOT1A5YKK6 2376 aaKnown RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 MTMR11A4FU01 709 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 E9PMD0 336 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 TM4SF5O14894 197 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 CLDN3O15551 220 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 XPOTO43592 962 aaKnown RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 RPP40O75818 363 aaKnown RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 CXCL8P10145 99 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 TYMPP19971 482 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 GABRR2P28476 465 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 RAP1GAPP47736 663 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 GPR158Q5T848 1215 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 N4BP2L1Q5TBK1 243 aaPredicted RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 KRT79Q5XKE5 535 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 RINT1Q6NUQ1 792 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 C1orf186Q6ZWK4 172 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 DNAJB7Q7Z6W7 309 aaPredicted RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 TTC8Q8TAM2 541 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 SPIRE2Q8WWL2 714 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 KIF12Q96FN5 646 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 ARRDC1-AS1Q9H2J1 176 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 NOL7Q9UMY1 257 aaKnown RBP19.22■□□□□ 0.67
NUP50-218ENST00000493456 PCDHGA5Q9Y5G8 931 aa19.22■□□□□ 0.67
NUP50-218ENST00000493456 TTC26A0AVF1 554 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 AXIN1O15169 862 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 AKAP3O75969 853 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 CLTAP09496 248 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 GUCY2CP25092 1073 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 SMTNP53814 917 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 GNL2Q13823 731 aaKnown RBP19.21■□□□□ 0.67
NUP50-218ENST00000493456 SF3A2Q15428 464 aaKnown RBP19.21■□□□□ 0.67
NUP50-218ENST00000493456 ITPRIPL2Q3MIP1 535 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 SEZ6Q53EL9 994 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 OVOS1Q6IE37 1185 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 DSTYKQ6XUX3 929 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 TMEM161BQ8NDZ6 487 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 THG1LQ9NWX6 298 aaKnown RBP19.21■□□□□ 0.67
NUP50-218ENST00000493456 ZMYM5Q9UJ78 669 aa19.21■□□□□ 0.67
NUP50-218ENST00000493456 SPEGQ15772 3267 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 WDFY3Q8IZQ1 3526 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 ATG13O75143 517 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
NUP50-218ENST00000493456 PLS3P13797 630 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 PAX3P23760 479 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 MCM2P49736 904 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 PPP2R3AQ06190 1150 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms