RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TATDN2Q93075 761 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 HLA-CQ95604 372 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 TMEM169Q96HH4 297 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 IGSF21Q96ID5 467 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 XYLT2Q9H1B5 865 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 COQ4Q9Y3A0 265 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
LIME1-208ENST00000493265 PMM2O15305 246 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 LPXNO60711 386 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 ASS1P00966 412 aaKnown RBP18.45■□□□□ 0.54
LIME1-208ENST00000493265 LINC00271P0C7V0 271 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 PON1P27169 355 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 KCNMA1Q12791 1236 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 NR1I3Q14994 352 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 TIGD5Q53EQ6 642 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 KLHL23Q8NBE8 558 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 B3GALT6Q96L58 329 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 SENP8Q96LD8 212 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
LIME1-208ENST00000493265 C1QTNF1Q9BXJ1 281 aa18.45■□□□□ 0.54
LIME1-208ENST00000493265 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
LIME1-208ENST00000493265 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
LIME1-208ENST00000493265 SCN1AP35498 2009 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
LIME1-208ENST00000493265 CYB561D2O14569 222 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 FGF18O76093 207 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 TPM3P06753 285 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 PPM1AP35813 382 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 PLA2G5P39877 138 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 RAP1GAPP47736 663 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 TRIM65Q6PJ69 517 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 RRAGAQ7L523 313 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 ARHGEF19Q8IW93 802 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 LMO3Q8TAP4 145 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 TAF4BQ92750 862 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 NT5C1BQ96P26 610 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 GPR62Q9BZJ7 368 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 FAM207AQ9NSI2 230 aaPredicted RBP18.44■□□□□ 0.54
LIME1-208ENST00000493265 RWDD3Q9Y3V2 267 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 BRWD1Q9NSI6 2320 aa18.44■□□□□ 0.54
LIME1-208ENST00000493265 NLRC5Q86WI3 1866 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 TMEM189-UBE2V1I3L0A0 370 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 TRAPPC3O43617 180 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 CA8P35219 290 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 KRT17Q04695 432 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 FAM171A1Q5VUB5 890 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 SARM1Q6SZW1 724 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 TAS1R1Q7RTX1 841 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 PPM1KQ8N3J5 372 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 FBXO22Q8NEZ5 403 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 FAM122AQ96E09 287 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 EPHX3Q9H6B9 360 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
LIME1-208ENST00000493265 ALG13Q9NP73 1137 aaKnown RBP18.43■□□□□ 0.54
LIME1-208ENST00000493265 SF3B1O75533 1304 aaKnown RBP eCLIP18.43■□□□□ 0.54
LIME1-208ENST00000493265 HUS1O60921 280 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 STAU1O95793 577 aaKnown RBP18.42■□□□□ 0.54
LIME1-208ENST00000493265 WEE2P0C1S8 567 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 ODC1P11926 461 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 P4HA1P13674 534 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 TKTP29401 623 aaKnown RBP18.42■□□□□ 0.54
LIME1-208ENST00000493265 CDH8P55286 799 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 ERVK-21P61565 698 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 GSE1Q14687 1217 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 PHLDB3Q6NSJ2 640 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 NEK11Q8NG66 645 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 SUSD3Q96L08 255 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 VN1R3Q9BXE9 311 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 NIF3L1Q9GZT8 377 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 SIX2Q9NPC8 291 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 UBE2TQ9NPD8 197 aaPredicted RBP18.42■□□□□ 0.54
LIME1-208ENST00000493265 SIK3Q9Y2K2 1263 aa18.42■□□□□ 0.54
LIME1-208ENST00000493265 CARNS1A5YM72 827 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 C2CD2LO14523 706 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 CD58P19256 250 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 ZNF75DP51815 510 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 ARHGAP44Q17R89 818 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 WSCD1Q658N2 575 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 KIAA1841Q6NSI8 718 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 VPS52Q8N1B4 723 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 APPL2Q8NEU8 664 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 KAT5Q92993 513 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 ERGIC2Q96RQ1 377 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 ARID3AQ99856 593 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 PLVAPQ9BX97 442 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 VRTNQ9H8Y1 702 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 GDAP2Q9NXN4 497 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 APEX2Q9UBZ4 518 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 PCDHB8Q9UN66 801 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 L1RE1Q9UN81 338 aa18.41■□□□□ 0.54
LIME1-208ENST00000493265 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 M0QZQ0 153 aa18.4■□□□□ 0.54
LIME1-208ENST00000493265 ASPAP45381 313 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms