RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PLD1Q13393 1074 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 RIPK1Q13546 671 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TRADDQ15628 312 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 C2orf76Q3KRA6 126 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 C4orf48Q5BLP8 95 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 IGSF11Q5DX21 431 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CEP78Q5JTW2 689 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 FBXO47Q5MNV8 452 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ZBTB41Q5SVQ8 909 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 RNASEH2BQ5TBB1 312 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MAP3K21Q5TCX8 1036 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SLC25A24Q6NUK1 477 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MTFR2Q6P444 385 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 DARS2Q6PI48 645 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 PAPD4Q6PIY7 484 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SASS6Q6UVJ0 657 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SEZ6L2Q6UXD5 910 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF765Q7L2R6 523 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 GLRX5Q86SX6 157 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 COMTD1Q86VU5 262 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 PALM2Q8IXS6 379 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 THNSL1Q8IYQ7 743 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MAML2Q8IZL2 1156 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CARFQ8N187 725 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TCP11L2Q8N4U5 519 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TSPYL6Q8N831 410 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF321PQ8N8H1 164 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ATG16L2Q8NAA4 619 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 EHBP1Q8NDI1 1231 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SHCBP1Q8NEM2 672 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SLC7A14Q8TBB6 771 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 FAM81AQ8TBF8 368 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SPPL3Q8TCT6 385 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 DDI1Q8WTU0 396 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ATP6V0A1Q93050 837 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 RILPL2Q969X0 211 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 VWCEQ96DN2 955 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 VCPIP1Q96JH7 1222 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CDK5RAP1Q96SZ6 601 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 EIF3CQ99613 913 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 C19orf43Q9BQ61 176 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 NTMT1Q9BV86 223 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 NFKBIZQ9BYH8 718 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SENP6Q9GZR1 1112 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ADNPQ9H2P0 1102 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SEMA6BQ9H3T3 888 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 COPS7BQ9H9Q2 264 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ATAD3AQ9NVI7 634 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF358Q9NW07 568 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 COX16Q9P0S2 106 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 KIF17Q9P2E2 1029 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 DNAJB9Q9UBS3 223 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ZNRF3Q9ULT6 936 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CLCA2Q9UQC9 943 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 PIN4Q9Y237 131 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TNFSF13BQ9Y275 285 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CFL2Q9Y281 166 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TRBV23-1A0A0A0MS06 115 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 A0A1B0GUL7 405 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 MAGEB16A2A368 324 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PDLIM1O00151 329 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 APOL1O14791 398 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 IFIT3O14879 490 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ATXN7O15265 892 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TBX10O75333 385 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TUSC2O75896 110 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 BEST1O76090 585 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RECQL4O94761 1208 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SEC31AO94979 1220 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ECDO95905 644 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CHRNA1P02708 482 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 PRR35P0CG20 571 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 BMP1P13497 986 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CTSSP25774 331 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RXRBP28702 533 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ADSSP30520 456 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RGS2P41220 211 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 ADCYAP1R1P41586 468 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 RABIFP47224 123 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TUFMP49411 452 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 WNT7BP56706 349 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KRT17Q04695 432 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 MAPK7Q13164 816 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 KCNAB2Q13303 367 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CAMK2GQ13555 558 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 IDI1Q13907 227 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SQLEQ14534 574 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 STARD3Q14849 445 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 MAPRE2Q15555 327 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CTXN3Q4LDR2 81 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 SLC39A12Q504Y0 691 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 HS1BP3Q53T59 392 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TDRD12Q587J7 1177 aaKnown RBP4.48□□□□□ -1.69
BRCA1-220ENST00000492859 UBXN11Q5T124 520 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 CENPPQ6IPU0 288 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM53Q6P2H8 277 aa4.48□□□□□ -1.69
BRCA1-220ENST00000492859 LILRA6Q6PI73 481 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms