RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 HES6Q96HZ4 224 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 DCLK3Q9C098 648 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MYLK2Q9H1R3 596 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 XPOTO43592 962 aaKnown RBP22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SNUPNO95149 360 aaKnown RBP22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 KAT2BQ92831 832 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CCDC138Q96M89 665 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MRPL4Q9BYD3 311 aaKnown RBP22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CCDC68Q9H2F9 335 aa22.13■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ECE2O60344 883 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PROSCO94903 275 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RBP3P10745 1247 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZNF568Q3ZCX4 644 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 NID2Q14112 1375 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 XRCC4Q13426 336 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MTFR1Q15390 333 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CHI3L2Q15782 390 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PEAK1Q9H792 1746 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PIK3CDO00329 1044 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RRM1P23921 792 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 KCNJ2P63252 427 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 GABPAQ06546 454 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TMEM237Q96Q45 408 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 LRRC4Q9HBW1 653 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PAK5Q9P286 719 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PCYOX1Q9UHG3 505 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZFXP17010 805 aaPredicted RBP22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SLC12A3P55017 1021 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CBWD2Q8IUF1 395 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 LRRC43Q8N309 656 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 EXD1Q8NHP7 514 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RNF146Q9NTX7 359 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 STK32BQ9NY57 414 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TBX20Q9UMR3 447 aa22.12■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TRIM49D1C9J1S8 452 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 OCRLQ01968 901 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SPATA18Q8TC71 538 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MMTAG2Q9BU76 263 aaKnown RBP22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 HGSNATQ68CP4 663 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PLA2G4FQ68DD2 849 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 DNAJC18Q9H819 358 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 LRCH1Q9Y2L9 728 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 NCANO14594 1321 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 LACTB2Q53H82 288 aaPredicted RBP22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 KLC3Q6P597 504 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SLC5A5Q92911 643 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ATP9AO75110 1047 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PYGBP11216 843 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TAC1P20366 129 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MMP13P45452 471 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RRP1BQ14684 758 aaKnown RBP22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 IRF2BP2Q7Z5L9 587 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SCUBE1Q8IWY4 988 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MAGEC3Q8TD91 643 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 INPP5DQ92835 1189 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 FAM167AQ96KS9 214 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TM9SF1O15321 606 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 MYL2P10916 166 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SERPINB3P29508 390 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 NDUFAF2Q8N183 169 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 KRT35Q92764 455 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PAFAH2Q99487 392 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 EPHB2P29323 1055 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZBTB17Q13105 803 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZCWPW2Q504Y3 356 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PCNX4Q63HM2 1172 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 FBXO36Q8NEA4 188 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 HIC2Q96JB3 615 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RNPEPL1Q9HAU8 725 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 IL1RAPL1Q9NZN1 696 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 BFARQ9NZS9 450 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 STXBP2Q15833 593 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CLEC16AQ2KHT3 1053 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CCNYL1Q8N7R7 359 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TMEM120AQ9BXJ8 343 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 RSAD1Q9HA92 442 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 GTSE1Q9NYZ3 720 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 EXTL3O43909 919 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 HNRNPCP07910 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SNX30Q5VWJ9 437 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 FRMD8Q9BZ67 464 aaPredicted RBP22.1■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZCCHC18P0CG32 403 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 GTF2H1P32780 548 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 GRAMD4Q6IC98 578 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 FAM71DQ8N9W8 422 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 PSPC1Q8WXF1 523 aaKnown RBP22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 KCNH7Q9NS40 1196 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 F5H423 210 aaPredicted RBP22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ADCY3O60266 1144 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 C2CD6Q53TS8 623 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 TMCO4Q5TGY1 634 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 HACE1Q8IYU2 909 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 SIX6OS1Q8N1H7 587 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 FRMD8P1Q9BZ68 369 aaPredicted RBP22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ANKEF1Q9NU02 776 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 GRID1Q9ULK0 1009 aa22.09■■□□□ 1.13
CHKB-CPT1B-203ENST00000492556 ZC3H11AO75152 810 aaKnown RBP eCLIP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms