RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 INSL5Q9Y5Q6 135 aa16.43■□□□□ 0.22
COL27A1-206ENST00000490831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-206ENST00000490831 ANHXE9PGG2 379 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 PRRG1O14668 218 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 VNN2O95498 520 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 CPB1P15086 417 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-206ENST00000490831 NTHL1P78549 312 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 TFAMQ00059 246 aaKnown RBP16.42■□□□□ 0.22
COL27A1-206ENST00000490831 ADCY1Q08828 1119 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 STK4Q13043 487 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 SV2CQ496J9 727 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 RNF19BQ6ZMZ0 732 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 HS2ST1Q7LGA3 356 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 NELFCDQ8IXH7 590 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 LRRC52Q8N7C0 313 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 KIAA0895Q8NCT3 520 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 CYP4F11Q9HBI6 524 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 EXOC1Q9NV70 894 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 INTS13Q9NVM9 706 aa16.42■□□□□ 0.22
COL27A1-206ENST00000490831 KPNA7A9QM74 516 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 CYB561D2O14569 222 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 LRG1P02750 347 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 ITGB3P05106 788 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 POLR2BP30876 1174 aaKnown RBP16.41■□□□□ 0.22
COL27A1-206ENST00000490831 TDGQ13569 410 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
COL27A1-206ENST00000490831 PABPC1LQ4VXU2 614 aaKnown RBP16.41■□□□□ 0.22
COL27A1-206ENST00000490831 KRBA2Q6ZNG9 492 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 GET4Q7L5D6 327 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-206ENST00000490831 XXYLT1Q8NBI6 393 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 GDPD2Q9HCC8 539 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 HCFC1R1Q9NWW0 138 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 SIX4Q9UIU6 781 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 CDH7Q9ULB5 785 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 POLIQ9UNA4 740 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 AGAP1Q9UPQ3 857 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 ZNF318Q5VUA4 2279 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 PTPRJQ12913 1337 aa16.41■□□□□ 0.22
COL27A1-206ENST00000490831 CLIC2O15247 247 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 RHOBTB3O94955 611 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 ZNF202O95125 648 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
COL27A1-206ENST00000490831 RHOP08100 348 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 OR4Q2P0C623 313 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 PTPN2P17706 415 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 DPYDQ12882 1025 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 HTR4Q13639 388 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 PSMD6Q15008 389 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 OR10T2Q8NGX3 314 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 ITFG1Q8TB96 612 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 SPATA18Q8TC71 538 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 FGF13Q92913 245 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 ANKRD36BP1Q96IX9 119 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 MFSD14AQ96MC6 490 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 DUSP12Q9UNI6 340 aa16.4■□□□□ 0.22
COL27A1-206ENST00000490831 MTMR11A4FU01 709 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 MICAL2O94851 1124 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 EPHA5P54756 1037 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 RBP5P82980 135 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 DUOXA2Q1HG44 320 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 PRSS36Q5K4E3 855 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 CENPPQ6IPU0 288 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 NPAS3Q8IXF0 933 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 CSGALNACT2Q8N6G5 542 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
COL27A1-206ENST00000490831 PBXIP1Q96AQ6 731 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 TMEM209Q96SK2 561 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 ZCWPW1Q9H0M4 648 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-206ENST00000490831 CRISPLD1Q9H336 500 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 CEP72Q9P209 647 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
COL27A1-206ENST00000490831 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
COL27A1-206ENST00000490831 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 CYP2J2P51589 502 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 TWF1Q12792 350 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 SMARCB1Q12824 385 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 KCNB1Q14721 858 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms