RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 FBXO36Q8NEA4 188 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 ETAA1Q9NY74 926 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
SHOX2-205ENST00000490689 H0YGN5 161 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 INO80B-WBP1J3KQ70 363 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 GZMAP12544 262 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 SLC34A1Q06495 639 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 CNGA3Q16281 694 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 CYP4A22Q5TCH4 519 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 SPOPLQ6IQ16 392 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 SENP7Q9BQF6 1050 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 GABBR1Q9UBS5 961 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 PCYOX1Q9UHG3 505 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RAD17O75943 681 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RBP3P10745 1247 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 VCAM1P19320 739 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 CDH6P55285 790 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 ANO5Q75V66 913 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 NDUFAF2Q8N183 169 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RIBC1Q8N443 379 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 C7orf31Q8N865 590 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 DNAAF3Q8N9W5 541 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 FBXO6Q9NRD1 293 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 MYH6P13533 1939 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 NEMP1O14524 444 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 TCN1P20061 433 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 ECE1P42892 770 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 DRG2P55039 364 aaKnown RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 DSG1Q02413 1049 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 STX3Q13277 289 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 ATP13A4Q4VNC1 1196 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 MCF2L2Q86YR7 1114 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-205ENST00000490689 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 RPTORQ8N122 1335 aa13.49□□□□□ -0.25
SHOX2-205ENST00000490689 BTNL10A8MVZ5 291 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 FCHO1O14526 889 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 GPC4O75487 556 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 PYGBP11216 843 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 CENPCQ03188 943 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 WASHC2DQ5SRD0 308 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 SWSAP1Q6NVH7 229 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 EEPD1Q7L9B9 569 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 POU5F2Q8N7G0 328 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 ART4Q93070 314 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 BTBD10Q9BSF8 475 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-205ENST00000490689 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 ZC3H7BQ9UGR2 993 aaKnown RBP13.48□□□□□ -0.25
SHOX2-205ENST00000490689 RICTORQ6R327 1708 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-205ENST00000490689 SUPT3HO75486 399 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 SOX10P56693 466 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 SLC35G1Q2M3R5 365 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 MIS18BP1Q6P0N0 1132 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 GPD1LQ8N335 351 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 CCDC33Q8N5R6 958 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 E2F7Q96AV8 911 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 FAM149B1Q96BN6 582 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 MEI4A8MW99 385 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 AIM2O14862 343 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 HLA-DRAP01903 254 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-205ENST00000490689 AQP5P55064 265 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 EPS8L1Q8TE68 723 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 OLFML3Q9NRN5 406 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 UBE4BO95155 1302 aa13.48□□□□□ -0.25
SHOX2-205ENST00000490689 A0A1W2PPM1 405 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 A6NJR5 290 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 DGKIO75912 1065 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 PAEPP09466 180 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 TAC1P20366 129 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 BLMHQ13867 455 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 BMPR2Q13873 1038 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 MCUQ8NE86 351 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ZSWIM2Q8NEG5 633 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms