RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PRR31Q5SQ13 230 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 TTC39AQ5SRH9 613 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 WLSQ5T9L3 541 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 RNF187Q5TA31 235 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PAPD7Q5XG87 772 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 TTLL5Q6EMB2 1281 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 LIPIQ6XZB0 460 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 LDHAL6AQ6ZMR3 332 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ANKS3Q6ZW76 656 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 CNGA4Q8IV77 575 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 FOXP4Q8IVH2 680 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MB21D2Q8IYB1 491 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 CRACR2BQ8N4Y2 399 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NOA1Q8NC60 698 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ANKRD20A12PQ8NF67 263 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MAGEC3Q8TD91 643 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MORC4Q8TE76 937 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 AENQ8WTP8 325 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 RPGRQ92834 1020 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 OSBP2Q969R2 916 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 CLIC6Q96NY7 704 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NAPGQ99747 312 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 DESI2Q9BSY9 194 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF747Q9BV97 191 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 LRRC2Q9BYS8 371 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 VPS11Q9H270 941 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NCOA5Q9HCD5 579 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF277Q9NRM2 450 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 POLLQ9UGP5 575 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MCM8Q9UJA3 840 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MAN1B1Q9UKM7 699 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF652Q9Y2D9 606 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NFE2L3Q9Y4A8 694 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 RTL9Q8NET4 1388 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 A0A1B0GTL3 188 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CCDC189A1A4V9 331 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 YDJCA8MPS7 323 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 EBAG9O00559 213 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 PLSCR1O15162 318 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 NPHS1O60500 1241 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 FUCA1P04066 466 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CSF1RP07333 972 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 HSPD1P10809 573 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 DNAJA1P31689 397 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 THBS2P35442 1172 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 MRPL12P52815 198 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ADKP55263 362 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ANTXR2P58335 489 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CKAP4Q07065 602 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CACNB2Q08289 660 aaPredicted RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 GOLGA8FQ08AF8 430 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 GOLGA8DPQ0D2H9 430 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 PPFIA1Q13136 1202 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 KCNAB2Q13303 367 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 DRP2Q13474 957 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 PNOCQ13519 176 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 STIM1Q13586 685 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 GRAPQ13588 217 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CUL4BQ13620 913 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 TRIM14Q14142 442 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 MTF1Q14872 753 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 SART3Q15020 963 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 KARSQ15046 597 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 EMC4Q5J8M3 183 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 HABP4Q5JVS0 413 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 SPATA1Q5VX52 437 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ISM2Q6H9L7 571 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 EEPD1Q7L9B9 569 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 TAX1BP1Q86VP1 789 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 VPS37DQ86XT2 251 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ANKRD18AQ8IVF6 992 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ADGRG2Q8IZP9 1017 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 LCORLQ8N3X6 602 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CERS5Q8N5B7 392 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 IGSF22Q8N9C0 903 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 C3orf20Q8ND61 904 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 FAM76AQ8TAV0 307 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 GRAPLQ8TC17 118 aaPredicted RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 DDX1Q92499 740 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ZBTB9Q96C00 473 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 CABS1Q96KC9 395 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 OSBPL2Q9H1P3 480 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 KAT14Q9H8E8 782 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 ARMT1Q9H993 441 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 MARCH2Q9P0N8 246 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 SAP30BPQ9UHR5 308 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 HOOK1Q9UJC3 728 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 FBXO2Q9UK22 296 aaPredicted RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 MYO6Q9UM54 1294 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 REXO2Q9Y3B8 237 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 HS3ST3A1Q9Y663 406 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 FAM169AQ9Y6X4 670 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 A0A0G2JMZ2 1700 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 LRRC37A2A6NM11 1700 aa3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 BAZ2BQ9UIF8 2168 aaKnown RBP3.8□□□□□ -1.8
CRNKL1-203ENST00000490258 TRPM7Q96QT4 1865 aa3.79□□□□□ -1.8
CRNKL1-203ENST00000490258 LOC285556D6RIA3 1793 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms