RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.98
USP39-216ENST00000490193 DTNBO60941 627 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 OAZ2O95190 189 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 MCF2P10911 925 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 MYL4P12829 197 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 GJA1P17302 382 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 WEE1P30291 646 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 CTHP32929 405 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ARPP19P56211 112 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.98
USP39-216ENST00000490193 CCINQ13939 588 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ANKRD1Q15327 319 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 TEAD2Q15562 447 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ZNF568Q3ZCX4 644 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 HAUS3Q68CZ6 603 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 RNF19BQ6ZMZ0 732 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 Q6ZS52 159 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 DDX12PQ92771 950 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 GTF3C6Q969F1 213 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 CHAMP1Q96JM3 812 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 TBC1D32Q96NH3 1257 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ACAP3Q96P50 834 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 MKNK1Q9BUB5 465 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 MRPL4Q9BYD3 311 aaKnown RBP8.96□□□□□ -0.98
USP39-216ENST00000490193 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
USP39-216ENST00000490193 YIPF1Q9Y548 306 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 FAM208BQ5VWN6 2430 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ATRXP46100 2492 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 ZZEF1O43149 2961 aa8.96□□□□□ -0.98
USP39-216ENST00000490193 MYH11P35749 1972 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 SLC38A8A6NNN8 435 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 M0QZQ0 153 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 EPN2O95208 641 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 VNN2O95498 520 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 OR52Z1P0C646 297 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 ZNF806P0C7X5 589 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 CPB1P15086 417 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 MCM4P33991 863 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 MCM7P33993 719 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 RAP1GAPP47736 663 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 NPTX2P47972 431 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP39-216ENST00000490193 KPNA1P52294 538 aaPredicted RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 PLD1Q13393 1074 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 ARHGAP29Q52LW3 1261 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 IL31Q6EBC2 164 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 TXNDC11Q6PKC3 985 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 MPZL3Q6UWV2 235 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 YAF2Q8IY57 180 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 DAW1Q8N136 415 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 NSUN7Q8NE18 718 aaKnown RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 C18orf25Q96B23 403 aaPredicted RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 DNAJC25Q9H1X3 360 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 BHMT2Q9H2M3 363 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 RTN4Q9NQC3 1192 aaKnown RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 C2orf42Q9NWW7 574 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 RBM19Q9Y4C8 960 aaKnown RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 ASB3Q9Y575 518 aa8.95□□□□□ -0.98
USP39-216ENST00000490193 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.95□□□□□ -0.98
USP39-216ENST00000490193 KIAA1549LQ6ZVL6 1849 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 OBSL1O75147 1896 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ANK1P16157 1881 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 A0A1W2PRU2 124 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 OR6C75A6NL08 312 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 AKAP3O75969 853 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 LARGE1O95461 756 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 FGF19O95750 216 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 LRPAP1P30533 357 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 SOX9P48436 509 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 FOSBP53539 338 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 PEX3P56589 373 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ANAPC15P60006 121 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 OSTNP61366 133 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 YWHAHQ04917 246 aaPredicted RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 GPR17Q13304 367 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 TRIM29Q14134 588 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ACAP1Q15027 740 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ECM1Q16610 540 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ME3Q16798 604 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 SLC10A6Q3KNW5 377 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 AASDHQ4L235 1098 aaPredicted RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 N4BP2L1Q5TBK1 243 aaPredicted RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 HEATR6Q6AI08 1181 aaKnown RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 CEP68Q76N32 757 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 ARID3BQ8IVW6 561 aaPredicted RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 ZNF454Q8N9F8 522 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 GAB3Q8WWW8 586 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 LRRC3BQ96PB8 259 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 NTPCRQ9BSD7 190 aaKnown RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 TARS2Q9BW92 718 aaKnown RBP8.94□□□□□ -0.98
USP39-216ENST00000490193 CRISPLD1Q9H336 500 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 SLITRK6Q9H5Y7 841 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 C17orf75Q9HAS0 396 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 POLD4Q9HCU8 107 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 HSFX1Q9UBD0 423 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 PCDHGA5Q9Y5G8 931 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms