RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TAF1BQ53T94 588 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 XKR3Q5GH77 459 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 TRIM68Q6AZZ1 485 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 IQCEQ6IPM2 695 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 NOTUMQ6P988 496 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 TMC8Q8IU68 726 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 MB21D2Q8IYB1 491 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 PDCD7Q8N8D1 485 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 BPIFB1Q8TDL5 484 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 IGDCC4Q8TDY8 1250 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 PRPF31Q8WWY3 499 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 GJA10Q969M2 543 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 TMEM143Q96AN5 459 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 CNOT6LQ96LI5 555 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ZNF512Q96ME7 567 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ARID3AQ99856 593 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 FAM83CQ9BQN1 747 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 POLR3CQ9BUI4 534 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 GKN1Q9NS71 199 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 PARP2Q9UGN5 583 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 IL17BQ9UHF5 180 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 SETD2Q9BYW2 2564 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 OBSL1O75147 1896 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 DPYSL4O14531 572 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 CHMP2AO43633 222 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ERLIN2O94905 339 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ARF4P18085 180 aaPredicted RBP8.05□□□□□ -1.12
COL9A1-209ENST00000489861 RXRAP19793 462 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 DRD1P21728 446 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ANTXR2P58335 489 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 AMHR2Q16671 573 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 PRR16Q569H4 304 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 BMP2KLQ5H9B9 411 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 LYSMD4Q5XG99 296 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 PLA2G4FQ68DD2 849 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ANKS3Q6ZW76 656 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ANO5Q75V66 913 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 GAREM2Q75VX8 874 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 DEFB119Q8N690 84 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 RNF149Q8NC42 400 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 LEMD2Q8NC56 503 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 SPIRE2Q8WWL2 714 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ACDQ96AP0 544 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 LENG9Q96B70 501 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 TRIM4Q9C037 500 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 SMG9Q9H0W8 520 aaKnown RBP8.05□□□□□ -1.12
COL9A1-209ENST00000489861 EBF3Q9H4W6 596 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 OBP2AQ9NY56 170 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 ANKMY1Q9P2S6 941 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 NXF1Q9UBU9 619 aaKnown RBP8.05□□□□□ -1.12
COL9A1-209ENST00000489861 PCOLCE2Q9UKZ9 415 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 TAF6LQ9Y6J9 622 aa8.05□□□□□ -1.12
COL9A1-209ENST00000489861 DDX11L8A8MPP1 907 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 PLK4O00444 970 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 SH2B2O14492 632 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 B4GALT5O43286 388 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 NPTXRO95502 500 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 NEFLP07196 543 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 C6P13671 934 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 ARSAP15289 507 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 AXLP30530 894 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 HOXD12P35452 270 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 BRCC3P46736 316 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 NPEPPSP55786 919 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 SETQ01105 290 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 AKAP17AQ02040 695 aaKnown RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 PTH1RQ03431 593 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 RUNX3Q13761 415 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 FBXO43Q4G163 708 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 JAKMIP3Q5VZ66 844 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 ELMOD1Q8N336 334 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 CEP76Q8TAP6 659 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 CCDC51Q96ER9 411 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 P2RY13Q9BPV8 354 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 TRIM6Q9C030 488 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 UNC45AQ9H3U1 944 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 ANO2Q9NQ90 1003 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 CIZ1Q9ULV3 898 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-209ENST00000489861 TBX20Q9UMR3 447 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 TMEM131Q92545 1883 aa8.04□□□□□ -1.12
COL9A1-209ENST00000489861 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 TMEM189-UBE2V1I3L0A0 370 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 EDIL3O43854 480 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
COL9A1-209ENST00000489861 B3GAT3O94766 335 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 VNN2O95498 520 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 THP07101 528 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 GP1BBP13224 206 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 GNA11P29992 359 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 CCR10P46092 362 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms