RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ZBTB6Q15916 424 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 PPM1LQ5SGD2 360 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 CDKAL1Q5VV42 579 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 HFE2Q6ZVN8 426 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 C12orf56Q8IXR9 622 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 FEZF2Q8TBJ5 459 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 SUSD3Q96L08 255 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 CPSF3Q9UKF6 684 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 CDY1Q9Y6F8 540 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 LACTBL1A8MY62 500 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 ADAM12O43184 909 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 XYLBO75191 536 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 KIF20AO95235 890 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 C8AP07357 584 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 PAX3P23760 479 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 MYL5Q02045 173 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 STIM1Q13586 685 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 ZBTB41Q5SVQ8 909 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 SLC8B1Q6J4K2 584 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 STXBP4Q6ZWJ1 553 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 APTXQ7Z2E3 356 aaKnown RBP11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 RNF214Q8ND24 703 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 BEST2Q8NFU1 509 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 PBXIP1Q96AQ6 731 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 TRIM44Q96DX7 344 aaPredicted RBP11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 CBWD1Q9BRT8 395 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 ASB7Q9H672 318 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 TMEM206Q9H813 350 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 SAMSN1Q9NSI8 373 aaKnown RBP11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.41□□□□□ -0.587e-7■□□□□ 9.9
SCAMP4-208ENST00000489554 RAPGEFL1Q9UHV5 662 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 AGO2Q9UKV8 859 aaKnown RBP11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 DERAQ9Y315 318 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
SCAMP4-208ENST00000489554 DENND4AQ7Z401 1863 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 BICDL2A1A5D9 508 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 CLIC2O15247 247 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 AP5Z1O43299 807 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 NR3C1P04150 777 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ASGR2P07307 311 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 CASP4P49662 377 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ACOT2P49753 483 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 MCCD1P59942 119 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ROR1Q01973 937 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 SPAG1Q07617 926 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ZNF280DQ6N043 979 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 RSPO2Q6UXX9 243 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 SLC9A9Q8IVB4 645 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 SLC7A14Q8TBB6 771 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 POMGNT1Q8WZA1 660 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ASIC4Q96FT7 647 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 OXCT2Q9BYC2 517 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 KCNH6Q9H252 994 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 IGSF9Q9P2J2 1179 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 EPS15L1Q9UBC2 864 aa11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
SCAMP4-208ENST00000489554 CITO14578 2027 aa11.4□□□□□ -0.59
SCAMP4-208ENST00000489554 ARHGEF37A1IGU5 675 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 M0QZQ0 153 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 TBC1D4O60343 1298 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 TECTAO75443 2155 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 AKAP3O75969 853 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 ABLIM3O94929 683 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 ATP1A3P13637 1013 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 ANK1P16157 1881 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 ELF1P32519 619 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 SNRPFP62306 86 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 TDGQ13569 410 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 TMEM132DQ14C87 1099 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 CTXN3Q4LDR2 81 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 TPGS2Q68CL5 300 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 GET4Q7L5D6 327 aaPredicted RBP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 SYCP3Q8IZU3 236 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 FBXL6Q8N531 539 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 BORCS6Q96GS4 357 aa11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-208ENST00000489554 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms