RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 HSDL1Q3SXM5 330 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 ZNF484Q5JVG2 852 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 SPOPLQ6IQ16 392 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 ADAT2Q7Z6V5 191 aaKnown RBP9.4□□□□□ -0.91
CSMD2-209ENST00000489419 CCDC105Q8IYK2 499 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 ZDHHC14Q8IZN3 488 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 UBLCP1Q8WVY7 318 aaPredicted RBP9.4□□□□□ -0.91
CSMD2-209ENST00000489419 ZNF606Q8WXB4 792 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 C18orf8Q96DM3 657 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 BTBD6Q96KE9 485 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 PABPC3Q9H361 631 aaKnown RBP9.4□□□□□ -0.91
CSMD2-209ENST00000489419 PARVAQ9NVD7 372 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 GRHL1Q9NZI5 618 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 CHORDC1Q9UHD1 332 aaPredicted RBP9.4□□□□□ -0.91
CSMD2-209ENST00000489419 PNMA3Q9UL41 463 aa9.4□□□□□ -0.91
CSMD2-209ENST00000489419 CAPN15O75808 1086 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 CALB1P05937 261 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 PGK2P07205 417 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 SRGAP2CP0DJJ0 459 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 IMPDH2P12268 514 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 FLT3P36888 993 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TAP1Q03518 808 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 MAMLD1Q13495 774 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 LAMC2Q13753 1193 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 FAM187BQ17R55 369 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 AADACL2Q6P093 401 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TTC27Q6P3X3 843 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 ZDHHC24Q6UX98 284 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 DLK2Q6UY11 383 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 EEPD1Q7L9B9 569 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 RHOT1Q8IXI2 618 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 GRK7Q8WTQ7 553 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 ART4Q93070 314 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 OPTNQ96CV9 577 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 MAGEB2O15479 319 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 THAP12O43422 761 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TXNP10599 105 aaKnown RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 MMP8P22894 467 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 CDH5P33151 784 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 CETN2P41208 172 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 PMS2P54278 862 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 PLTPP55058 493 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 GNGT1P63211 74 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 CCNA1P78396 465 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 SNAPC2Q13487 334 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TRPC3Q13507 836 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 KYAT1Q16773 422 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 HOOK3Q86VS8 718 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 KATNAL2Q8IYT4 538 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 FEZF2Q8TBJ5 459 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 TMEM109Q9BVC6 243 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 ERAP1Q9NZ08 941 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 WHRNQ9P202 907 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
CSMD2-209ENST00000489419 IP6K2Q9UHH9 426 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 SLC45A1Q9Y2W3 748 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 SNX24Q9Y343 169 aa9.39□□□□□ -0.91
CSMD2-209ENST00000489419 UMODL1Q5DID0 1318 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 CST3P01034 146 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-209ENST00000489419 TNNC2P02585 160 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 ITIH2P19823 946 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
CSMD2-209ENST00000489419 RPL21P46778 160 aaKnown RBP9.38□□□□□ -0.91
CSMD2-209ENST00000489419 CAV1Q03135 178 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 CCDC15Q0P6D6 951 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 SGO2Q562F6 1265 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 LRRC38Q5VT99 294 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 TMEM35BQ8NCS4 154 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 EXD1Q8NHP7 514 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 FBXO25Q8TCJ0 367 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 ANKRD36BP1Q96IX9 119 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 TRIM31Q9BZY9 425 aa9.38□□□□□ -0.91
CSMD2-209ENST00000489419 FAM124BQ9H5Z6 455 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-209ENST00000489419 PRMT7Q9NVM4 692 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-209ENST00000489419 GRIN2DO15399 1336 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 TCRBV7S2A1N4TA0A589 114 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 HOXC6P09630 235 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 RARGP13631 454 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 MARK3P27448 753 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 MDH1P40925 334 aaKnown RBP9.37□□□□□ -0.91
CSMD2-209ENST00000489419 TNFSF9P41273 254 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 TNFAIP2Q03169 654 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 CCNG2Q16589 344 aa9.37□□□□□ -0.91
CSMD2-209ENST00000489419 PUS10Q3MIT2 529 aaKnown RBP9.37□□□□□ -0.91
CSMD2-209ENST00000489419 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms