RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 USP18Q9UMW8 372 aa10.18□□□□□ -0.78
SNX17-207ENST00000489402 TIMM13Q9Y5L4 95 aaPredicted RBP10.18□□□□□ -0.78
SNX17-207ENST00000489402 A0A1W2PRU2 124 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 HEPACAM2A8MVW5 462 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 H3BQV1 296 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 K7ENM7 598 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 DPYSL4O14531 572 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 OGTO15294 1046 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CHADO15335 359 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 SLC26A4O43511 780 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 MOSPD3O75425 235 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 FGF19O95750 216 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 ODC1P11926 461 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 TYMPP19971 482 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 PAX3P23760 479 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CCNE1P24864 410 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 TNFSF9P41273 254 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNX17-207ENST00000489402 GUCY2FP51841 1108 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 KPNA1P52294 538 aaPredicted RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 MLLT6P55198 1093 aaPredicted RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 DUSP4Q13115 394 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 GPR17Q13304 367 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 MYBPC2Q14324 1141 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 LRRC32Q14392 662 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 ARHGAP15Q53QZ3 475 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 ARL6IP4Q66PJ3 421 aaKnown RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 ARMCX5Q6P1M9 558 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 PRR23BQ6ZRT6 265 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CD302Q8IX05 232 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 SHKBP1Q8TBC3 707 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 RSPRY1Q96DX4 576 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CALML4Q96GE6 196 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 AK8Q96MA6 479 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 CRISPLD1Q9H336 500 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 C8orf33Q9H7E9 229 aaPredicted RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 ASB3Q9Y575 518 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 OTOGLQ3ZCN5 2332 aa10.17□□□□□ -0.78
SNX17-207ENST00000489402 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
SNX17-207ENST00000489402 GPR179Q6PRD1 2367 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 PPEF2O14830 753 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 FAM13AO94988 1023 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ABCD1P33897 745 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 CXCL12P48061 93 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 VEPH1Q14D04 833 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ZBTB6Q15916 424 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 TMEM119Q4V9L6 283 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 WDR44Q5JSH3 913 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 LAIR1Q6GTX8 287 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ITIH5Q86UX2 942 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 GPBP1Q86WP2 473 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 TMC8Q8IU68 726 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 SPEM1Q8N4L4 309 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 MYCT1Q8N699 235 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 CELF5Q8N6W0 485 aaKnown RBP10.16□□□□□ -0.78
SNX17-207ENST00000489402 RASSF8Q8NHQ8 419 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 GCNAQ96QF7 691 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 REEP2Q9BRK0 252 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ATXN3LQ9H3M9 355 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 TBX20Q9UMR3 447 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 ANK1P16157 1881 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 TSC2P49815 1807 aa10.16□□□□□ -0.78
SNX17-207ENST00000489402 LAMA1P25391 3075 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 MTMR11A4FU01 709 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 SLC38A8A6NNN8 435 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 ARNTLO00327 626 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 TRAK2O60296 914 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 TBCAO75347 108 aaKnown RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 PIGRP01833 764 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 KRT18P05783 430 aaKnown RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 CHRNB1P11230 501 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 TDGF1P13385 188 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 UBA7P41226 1012 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 ATXN1P54253 815 aaKnown RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 LILRA4P59901 499 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 SATB1Q01826 763 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 GRIN1Q05586 938 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 FCHO2Q0JRZ9 810 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 DHX8Q14562 1220 aaKnown RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 TMEM132DQ14C87 1099 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 RABEP1Q15276 862 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 ENOX2Q16206 610 aaKnown RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 TAF12Q16514 161 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 LPAL2Q16609 132 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 C8orf34Q49A92 452 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 ARHGAP29Q52LW3 1261 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 DGKKQ5KSL6 1271 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 SPATA1Q5VX52 437 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 SCARA3Q6AZY7 606 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 JADE1Q6IE81 842 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 CENPPQ6IPU0 288 aa10.15□□□□□ -0.78
SNX17-207ENST00000489402 DNAJB7Q7Z6W7 309 aaPredicted RBP10.15□□□□□ -0.78
SNX17-207ENST00000489402 RALGPS2Q86X27 583 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms