RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SP2Q02086 613 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 FOXC1Q12948 553 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 NR1H3Q13133 447 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 KYAT1Q16773 422 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 DUSP28Q4G0W2 176 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 CELF3Q5SZQ8 465 aaKnown RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 ACAD10Q6JQN1 1059 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 WDR49Q8IV35 697 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 ZBTB8OSQ8IWT0 167 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 CD302Q8IX05 232 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 RPUSD2Q8IZ73 545 aaKnown RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 TAS1R2Q8TE23 839 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 MAIP1Q8WWC4 291 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 CCDC127Q96BQ5 260 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 LRRC45Q96CN5 670 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 SAAL1Q96ER3 474 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 KREMEN1Q96MU8 473 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 FAM213AQ9BRX8 229 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 MRPL4Q9BYD3 311 aaKnown RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 IMPG2Q9BZV3 1241 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 THAP2Q9H0W7 228 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 FAM114A2Q9NRY5 505 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
VTI1A-207ENST00000489357 NOC2LQ9Y3T9 749 aaKnown RBP9.04□□□□□ -0.96
VTI1A-207ENST00000489357 COL1A2P08123 1366 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 GOLGA8IPA6NC78 632 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 LRRIQ4A6NIV6 560 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 NOP56O00567 594 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 PODXLO00592 558 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 DDX3YO15523 660 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 SART1O43290 800 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 HBP1O60381 514 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 HSF2BPO75031 334 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 ARIH2O95376 493 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 C4BPAP04003 597 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 FBXO45P0C2W1 286 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 CHRNB2P17787 502 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 CTNNA1P35221 906 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 TCF7P36402 384 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 ADCYAP1R1P41586 468 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 FMO1Q01740 532 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 TNFAIP2Q03169 654 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 PTP4A2Q12974 167 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 NOP9Q86U38 636 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 BRSK2Q8IWQ3 736 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 FBXO16Q8IX29 292 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 DDX1Q92499 740 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 SEMA4DQ92854 862 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 MS4A14Q96JA4 679 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 MRGPRX2Q96LB1 330 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 RUFY1Q96T51 708 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 PSMB7Q99436 277 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 PCYT2Q99447 389 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 GPR20Q99678 358 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 SH3GL2Q99962 352 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 KIFC3Q9BVG8 833 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 CCDC113Q9H0I3 377 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 EPB41L5Q9HCM4 733 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 SEPT11Q9NVA2 429 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 CTTNBP2NLQ9P2B4 639 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 PARP2Q9UGN5 583 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 RASAL2Q9UJF2 1139 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 MTUS1Q9ULD2 1270 aa9.03□□□□□ -0.96
VTI1A-207ENST00000489357 UTP11Q9Y3A2 253 aaKnown RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 TRIP12Q14669 1992 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-207ENST00000489357 H3BQF6 201 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 DNM1LO00429 736 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 OGTO15294 1046 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MAGEB2O15479 319 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CLDN3O15551 220 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CYP26A1O43174 497 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 RPS6KA5O75582 802 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ERLIN2O94905 339 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 GLI1P08151 1106 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 DLATP10515 647 aaKnown RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 RARBP10826 455 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 UNGP13051 313 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 TNNI1P19237 187 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ABCB4P21439 1286 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CHRNA3P32297 505 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MAN1A1P33908 653 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 HSPA9P38646 679 aaKnown RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 PIK3CAP42336 1068 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MATR3P43243 847 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 GUCY2DQ02846 1103 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms