RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 ZNF233A6NK53 670 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 OR6C75A6NL08 312 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 PRRG1O14668 218 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 ITGB3P05106 788 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 CYP11A1P05108 521 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 CPB1P15086 417 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 POLR2BP30876 1174 aaKnown RBP22.85■■□□□ 1.25
LIME1-207ENST00000489212 ITFG1Q8TB96 612 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 MTMR12Q9C0I1 747 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 EXOC1Q9NV70 894 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.85■■□□□ 1.25
LIME1-207ENST00000489212 SIX4Q9UIU6 781 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 AGAP1Q9UPQ3 857 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 INSL5Q9Y5Q6 135 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 ZNF318Q5VUA4 2279 aa22.85■■□□□ 1.25
LIME1-207ENST00000489212 CYB561D2O14569 222 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 LAMP2P13473 410 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 CYP2J2P51589 502 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 KNOP1Q1ED39 458 aaKnown RBP22.84■■□□□ 1.25
LIME1-207ENST00000489212 KRBA2Q6ZNG9 492 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 UBALD2Q8IYN6 164 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 RDH13Q8NBN7 331 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 OR5B17Q8NGF7 314 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 OR10T2Q8NGX3 314 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 CACTINQ8WUQ7 758 aaKnown RBP22.84■■□□□ 1.25
LIME1-207ENST00000489212 RSAD2Q8WXG1 361 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 PGLYRP2Q96PD5 576 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 RTP3Q9BQQ7 232 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 OXCT2Q9BYC2 517 aaPredicted RBP22.84■■□□□ 1.25
LIME1-207ENST00000489212 CRISPLD1Q9H336 500 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 INTS13Q9NVM9 706 aa22.84■■□□□ 1.25
LIME1-207ENST00000489212 KPNA7A9QM74 516 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 LRG1P02750 347 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 MYL1P05976 194 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 SNRPFP62306 86 aaKnown RBP22.83■■□□□ 1.25
LIME1-207ENST00000489212 GPR17Q13304 367 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 MYBPC2Q14324 1141 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 SNRNP35Q16560 246 aaKnown RBP22.83■■□□□ 1.25
LIME1-207ENST00000489212 PABPC1LQ4VXU2 614 aaKnown RBP22.83■■□□□ 1.25
LIME1-207ENST00000489212 WSCD1Q658N2 575 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 HS2ST1Q7LGA3 356 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 CSGALNACT2Q8N6G5 542 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 ST13P5Q8NFI4 369 aaPredicted RBP22.83■■□□□ 1.25
LIME1-207ENST00000489212 ZNF560Q96MR9 790 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 KIAA1586Q9HCI6 787 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 ITGA11Q9UKX5 1188 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 MAFFQ9ULX9 164 aa22.83■■□□□ 1.25
LIME1-207ENST00000489212 ZNF202O95125 648 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 RPN1P04843 607 aaKnown RBP22.82■■□□□ 1.24
LIME1-207ENST00000489212 RHOP08100 348 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 PSMD2Q13200 908 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 SLC5A9Q2M3M2 681 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 SV2CQ496J9 727 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 BMP8AQ7Z5Y6 402 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 C12orf56Q8IXR9 622 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 XXYLT1Q8NBI6 393 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 FGF13Q92913 245 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 IGSF9Q9P2J2 1179 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 DSEQ9UL01 958 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 CDH7Q9ULB5 785 aa22.82■■□□□ 1.24
LIME1-207ENST00000489212 MUC6Q6W4X9 2439 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 TMEM191BP0C7N4 346 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 PNPLA4P41247 253 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 TWF1Q12792 350 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 DPYDQ12882 1025 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 TDGQ13569 410 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 POTEHQ6S545 545 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 ATAD1Q8NBU5 361 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 PBXIP1Q96AQ6 731 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
LIME1-207ENST00000489212 CEP72Q9P209 647 aa22.81■■□□□ 1.24
LIME1-207ENST00000489212 CGNQ9P2M7 1197 aaKnown RBP22.81■■□□□ 1.24
LIME1-207ENST00000489212 MTMR11A4FU01 709 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 ANHXE9PGG2 379 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 NRG2O14511 850 aaPredicted RBP22.8■■□□□ 1.24
LIME1-207ENST00000489212 PDGFBP01127 241 aaPredicted RBP22.8■■□□□ 1.24
LIME1-207ENST00000489212 KRT19P08727 400 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 PTPN2P17706 415 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 RBP5P82980 135 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 CYP24A1Q07973 514 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 DUSP4Q13115 394 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 SURF1Q15526 300 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 CENPPQ6IPU0 288 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 METTL23Q86XA0 190 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 LRRC52Q8N7C0 313 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 ING5Q8WYH8 240 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 ANKRD36BP1Q96IX9 119 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 ZCWPW1Q9H0M4 648 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 KCTD10Q9H3F6 313 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 AVENQ9NQS1 362 aaPredicted RBP22.8■■□□□ 1.24
LIME1-207ENST00000489212 YIPF1Q9Y548 306 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 WDFY4Q6ZS81 3184 aa22.8■■□□□ 1.24
LIME1-207ENST00000489212 NARSO43776 548 aaKnown RBP22.79■■□□□ 1.24
LIME1-207ENST00000489212 CDR1P51861 262 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 BFSP1Q12934 665 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 HTR4Q13639 388 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 PSMD6Q15008 389 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 DUOXA2Q1HG44 320 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 PRSS36Q5K4E3 855 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 LRRTM3Q86VH5 581 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms