RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
VTI1A-206ENST00000489142 KRBA1A5PL33 1030 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 CYB561D2O14569 222 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 PI15O43692 258 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 SRFP11831 508 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 GJA1P17302 382 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 NPR3P17342 541 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 PTPN2P17706 415 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 TYMPP19971 482 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 GARTP22102 1010 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 POLR2BP30876 1174 aaKnown RBP15.15■□□□□ 0.02
VTI1A-206ENST00000489142 CUL4BQ13620 913 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 PRSS36Q5K4E3 855 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 ASTLQ6HA08 431 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-206ENST00000489142 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 PDE11AQ9HCR9 933 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 FAM86C1Q9NVL1 165 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
VTI1A-206ENST00000489142 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 STK25O00506 426 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 EXTL3O43909 919 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 ITGB3P05106 788 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 MYL4P12829 197 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
VTI1A-206ENST00000489142 TAF6P49848 677 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 GPC5P78333 572 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 AMPD3Q01432 767 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 DUSP4Q13115 394 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 SLC39A12Q504Y0 691 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 FAM26FQ5R3K3 315 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 WSCD1Q658N2 575 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 PDZD4Q76G19 769 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-206ENST00000489142 RTL10Q7L3V2 364 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 GPD1LQ8N335 351 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 ELMOD1Q8N336 334 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 C1orf127Q8N9H9 656 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 RTP3Q9BQQ7 232 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 MTMR12Q9C0I1 747 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 SERTAD1Q9UHV2 236 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 RCOR1Q9UKL0 485 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 KCNH3Q9ULD8 1083 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 ZFP37Q9Y6Q3 630 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-206ENST00000489142 PTPRJQ12913 1337 aa15.14■□□□□ 0.01
VTI1A-206ENST00000489142 A0A1B0GVL5 298 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 MTMR11A4FU01 709 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 CLIC2O15247 247 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
VTI1A-206ENST00000489142 KRT19P08727 400 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 BFSP1Q12934 665 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 GPR17Q13304 367 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 ATL3Q6DD88 541 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 STXBP4Q6ZWJ1 553 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 UNC13DQ70J99 1090 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 MTSS1LQ765P7 747 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 EPM2AIP1Q7L775 607 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-206ENST00000489142 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
VTI1A-206ENST00000489142 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 LEO1Q8WVC0 666 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-206ENST00000489142 NXPE3Q969Y0 559 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF512Q96ME7 567 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 PLA2G2FQ9BZM2 168 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 SLC39A2Q9NP94 309 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 HSPBP1Q9NZL4 362 aa15.13■□□□□ 0.01
VTI1A-206ENST00000489142 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 H0Y858 1186 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 TGFB1I1O43294 461 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
VTI1A-206ENST00000489142 CYP11A1P05108 521 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 PFKFB1P16118 471 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 RFX1P22670 979 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 CYP2J2P51589 502 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 PTPN5P54829 565 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 POU5F1Q01860 360 aaKnown RBP15.12■□□□□ 0.01
VTI1A-206ENST00000489142 MYBPC2Q14324 1141 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 SV2CQ496J9 727 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 IQCEQ6IPM2 695 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 CENPPQ6IPU0 288 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 METTL23Q86XA0 190 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 CSGALNACT2Q8N6G5 542 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 RDH13Q8NBN7 331 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 SCFD1Q8WVM8 642 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 BORCS6Q96GS4 357 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 SPATA32Q96LK8 384 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 ZSWIM3Q96MP5 696 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 SEPT5Q99719 369 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-206ENST00000489142 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 TBC1D17Q9HA65 648 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-206ENST00000489142 ASAH2Q9NR71 780 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 WNT16Q9UBV4 365 aa15.12■□□□□ 0.01
VTI1A-206ENST00000489142 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms