RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SLC5A9Q2M3M2 681 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 CEP57L1Q8IYX8 460 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 C1orf127Q8N9H9 656 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 SCFD1Q8WVM8 642 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 NXPE3Q969Y0 559 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 PGLYRP2Q96PD5 576 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 TMEM209Q96SK2 561 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 MAFFQ9ULX9 164 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 HPSEQ9Y251 543 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 PVALEFA0A1B0GWK0 134 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 KIAA0391O15091 583 aaKnown RBP26.99■■□□□ 1.91
HMGN1-217ENST00000489072 NPAS3Q8IXF0 933 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 OR10T2Q8NGX3 314 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 CXorf38Q8TB03 319 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 ING5Q8WYH8 240 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 PAGE5Q96GU1 130 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 CRISPLD1Q9H336 500 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 AVENQ9NQS1 362 aaPredicted RBP26.99■■□□□ 1.91
HMGN1-217ENST00000489072 HSPBP1Q9NZL4 362 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 NUMBLQ9Y6R0 609 aa26.99■■□□□ 1.91
HMGN1-217ENST00000489072 UBE4BO95155 1302 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 CYB561D2O14569 222 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 KLRC4O43908 158 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 PTPN2P17706 415 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 POLR2BP30876 1174 aaKnown RBP26.98■■□□□ 1.91
HMGN1-217ENST00000489072 PLA2G5P39877 138 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 GPR17Q13304 367 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 MYBPC2Q14324 1141 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 IER5LQ5T953 404 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 POTEHQ6S545 545 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 PARM1Q6UWI2 310 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 CBWD2Q8IUF1 395 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 NELFCDQ8IXH7 590 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 FGF14Q92915 247 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 RTP3Q9BQQ7 232 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 CORO1BQ9BR76 489 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 RPP25Q9BUL9 199 aaKnown RBP26.98■■□□□ 1.91
HMGN1-217ENST00000489072 SLC39A2Q9NP94 309 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 AGPAT3Q9NRZ7 376 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 CEP72Q9P209 647 aa26.98■■□□□ 1.91
HMGN1-217ENST00000489072 MRPS23Q9Y3D9 190 aaKnown RBP26.98■■□□□ 1.91
HMGN1-217ENST00000489072 PTPRJQ12913 1337 aa26.97■■□□□ 1.91
HMGN1-217ENST00000489072 ITGB3P05106 788 aa26.97■■□□□ 1.91
HMGN1-217ENST00000489072 TWF1Q12792 350 aa26.97■■□□□ 1.91
HMGN1-217ENST00000489072 LMBRD2Q68DH5 695 aaPredicted RBP26.97■■□□□ 1.91
HMGN1-217ENST00000489072 CACTINQ8WUQ7 758 aaKnown RBP26.97■■□□□ 1.91
HMGN1-217ENST00000489072 AGAP1Q9UPQ3 857 aa26.97■■□□□ 1.91
HMGN1-217ENST00000489072 YIPF1Q9Y548 306 aa26.97■■□□□ 1.91
HMGN1-217ENST00000489072 MTMR11A4FU01 709 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 KPNA7A9QM74 516 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 NRG2O14511 850 aaPredicted RBP26.96■■□□□ 1.91
HMGN1-217ENST00000489072 BMT2Q1RMZ1 405 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 SV2CQ496J9 727 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 PRSS36Q5K4E3 855 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 WSCD1Q658N2 575 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 FAM122AQ96E09 287 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 TCEAL4Q96EI5 215 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 ZNF560Q96MR9 790 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 MTMR12Q9C0I1 747 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 KCNH6Q9H252 994 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 SIX4Q9UIU6 781 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 DSEQ9UL01 958 aa26.96■■□□□ 1.91
HMGN1-217ENST00000489072 FAM237AA0A1B0GTK4 181 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 ZNF233A6NK53 670 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CLIC2O15247 247 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CEBPBP17676 345 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 AVPR2P30518 371 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CCR2P41597 374 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 DUSP4Q13115 394 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CENPPQ6IPU0 288 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 HS6ST3Q8IZP7 471 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 TTC9BQ8N6N2 239 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 ATAD1Q8NBU5 361 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 ITGA11Q9UKX5 1188 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 ATP6V1DQ9Y5K8 247 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CACNA1HO95180 2353 aa26.95■■□□□ 1.9
HMGN1-217ENST00000489072 CFHP08603 1231 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 SRFP11831 508 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 PNPLA4P41247 253 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 NDUFA8P51970 172 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 BECN1Q14457 450 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 METTL23Q86XA0 190 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 CSGALNACT2Q8N6G5 542 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 PRSS33Q8NF86 280 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 OR5B17Q8NGF7 314 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 MCRS1Q96EZ8 462 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 SCAND2PQ9GZW5 306 aaPredicted RBP26.94■■□□□ 1.9
HMGN1-217ENST00000489072 ZCWPW1Q9H0M4 648 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 INTS13Q9NVM9 706 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 USP25Q9UHP3 1055 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 FBXL21Q9UKT6 434 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 SLC27A5Q9Y2P5 690 aa26.94■■□□□ 1.9
HMGN1-217ENST00000489072 TMEM191BP0C7N4 346 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 CYP2J2P51589 502 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 CDR1P51861 262 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 ELMOD1Q8N336 334 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 LRRC52Q8N7C0 313 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 ZNF512Q96ME7 567 aaPredicted RBP26.93■■□□□ 1.9
HMGN1-217ENST00000489072 DNAJC25Q9H1X3 360 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 GDPD2Q9HCC8 539 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms