RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ITGB3P05106 788 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 MYL1P05976 194 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 ADRB2P07550 413 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 RHOP08100 348 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 CFHP08603 1231 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 DLATP10515 647 aaKnown RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 MYL4P12829 197 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 TNNI1P19237 187 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 SNRPFP62306 86 aaKnown RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 MYL7Q01449 175 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 TWF1Q12792 350 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 MYBPC2Q14324 1141 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 SNRNP35Q16560 246 aaKnown RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 SLC39A12Q504Y0 691 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 CNNM4Q6P4Q7 775 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 BMP8AQ7Z5Y6 402 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 ITIH5Q86UX2 942 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 DCP1BQ8IZD4 617 aaKnown RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 FGF13Q92913 245 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 STRA6Q9BX79 667 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 IKZF4Q9H2S9 585 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 GDE1Q9NZC3 331 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 HSPBP1Q9NZL4 362 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 SERTAD1Q9UHV2 236 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 DUSP12Q9UNI6 340 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 MYH11P35749 1972 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 ZDBF2Q9HCK1 2354 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PIRO00625 290 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PPEF2O14830 753 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PHACTR2O75167 634 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 FGF19O95750 216 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 OR4Q2P0C623 313 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 SRFP11831 508 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 CASP1P29466 404 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 TUFMP49411 452 aaKnown RBP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 AARSP49588 968 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PTPN5P54829 565 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 SMARCB1Q12824 385 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PSMD2Q13200 908 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 GPR17Q13304 367 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 TRPC3Q13507 836 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 CUL4BQ13620 913 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 MRPL58Q14197 206 aaKnown RBP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 MGAT5BQ3V5L5 792 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 ARHGAP15Q53QZ3 475 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 EFCAB13Q8IY85 973 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 GRAMD1CQ8IYS0 662 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 SIX5Q8N196 739 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 LRRC52Q8N7C0 313 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 RSAD2Q8WXG1 361 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 MCRS1Q96EZ8 462 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PAGE5Q96GU1 130 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 SHDQ96IW2 340 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 FGFBP2Q9BYJ0 223 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 MTMR12Q9C0I1 747 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 AGPAT3Q9NRZ7 376 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 HCFC1R1Q9NWW0 138 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 DNMT3BQ9UBC3 853 aaKnown RBP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 HOOK1Q9UJC3 728 aaKnown RBP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 ARIH1Q9Y4X5 557 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-232ENST00000489053 YIPF1Q9Y548 306 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 NUMBLQ9Y6R0 609 aa9.83□□□□□ -0.84
HDAC6-232ENST00000489053 ANO9A1A5B4 782 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 DPYSL4O14531 572 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 CLIC2O15247 247 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SPTLC1O15269 473 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 N4BP1O75113 896 aaKnown RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SEC24AO95486 1093 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 PCSK1P29120 753 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 PLA2G5P39877 138 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 TNNC1P63316 161 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 PFKPQ01813 784 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 DUSP4Q13115 394 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 BIRC3Q13489 604 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 HTR4Q13639 388 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 NFE2Q16621 373 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 WSCD1Q658N2 575 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 CRELD2Q6UXH1 353 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 CBWD2Q8IUF1 395 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 TMEM86AQ8N2M4 240 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 TMEM130Q8N3G9 435 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 SLC44A3Q8N4M1 653 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 GLIS3Q8NEA6 775 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ITFG1Q8TB96 612 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 FEZF2Q8TBJ5 459 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ZNF507Q8TCN5 953 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
HDAC6-232ENST00000489053 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
HDAC6-232ENST00000489053 HPDLQ96IR7 371 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms