RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GJA1P17302 382 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 PAX3P23760 479 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 WNT7BP56706 349 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 SLC44A4Q53GD3 710 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 ARMCX5Q6P1M9 558 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 CCDC65Q8IXS2 484 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 CCDC105Q8IYK2 499 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 DHX58Q96C10 678 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 ZSWIM3Q96MP5 696 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 SIT1Q9Y3P8 196 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 YIPF1Q9Y548 306 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
CCHCR1-215ENST00000488920 CITO14578 2027 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 MOSPD3O75425 235 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 ECI2O75521 394 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 SOAT2O75908 522 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 MICAL2O94851 1124 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 GARTP22102 1010 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 ALDH1A3P47895 512 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 TAF6P49848 677 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 EPHB3P54753 998 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 STARD6P59095 220 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 ALCAMQ13740 583 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 E2F4Q16254 413 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 WSCD1Q658N2 575 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 CENPPQ6IPU0 288 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 METTL23Q86XA0 190 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 SHDQ96IW2 340 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 FOXQ1Q9C009 403 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 ASAH2Q9NR71 780 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.34
CCHCR1-215ENST00000488920 MTMR11A4FU01 709 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 EXTL3O43909 919 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 LRRN2O75325 713 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 F13A1P00488 732 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 CYP11A1P05108 521 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 FCARP24071 287 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 PFKPQ01813 784 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 PKP1Q13835 747 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 TEAD2Q15562 447 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 SLC39A12Q504Y0 691 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 ELSPBP1Q96BH3 223 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 BORCS6Q96GS4 357 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 ZFP14Q9HCL3 533 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 DSEQ9UL01 958 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
CCHCR1-215ENST00000488920 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 POLR2DO15514 142 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 GFRA3O60609 400 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 CD72P21854 359 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 HOXD13P35453 343 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 VIPR2P41587 438 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 ME1P48163 572 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 EPHA5P54756 1037 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 ASIC1P78348 528 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 AMPD3Q01432 767 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 PLD1Q13393 1074 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 GRM2Q14416 872 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 SV2CQ496J9 727 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 DNAJB7Q7Z6W7 309 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 LRRTM3Q86VH5 581 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 NT5DC4Q86YG4 428 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 THEM5Q8N1Q8 247 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms