RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 C1orf53Q5VUE5 145 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 LRRC52Q8N7C0 313 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 FAXDC2Q96IV6 333 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 WDR24Q96S15 920 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 PCDHB18PQ96TA0 734 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
COL21A1-211ENST00000488912 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 CACNG4Q9UBN1 327 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 MACROD2A1Z1Q3 448 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 C9IYK1 514 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
COL21A1-211ENST00000488912 PIRO00625 290 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 PJA2O43164 708 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 P4HA1P13674 534 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 GNA15P30679 374 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 PLEKHG4Q58EX7 1191 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 C10orf76Q5T2E6 689 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 SCLYQ96I15 445 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 PAWRQ96IZ0 340 aaKnown RBP11.67□□□□□ -0.54
COL21A1-211ENST00000488912 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 ATP11BQ9Y2G3 1177 aa11.67□□□□□ -0.54
COL21A1-211ENST00000488912 KIF5CO60282 957 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 THP07101 528 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SKIP12755 728 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 CCL23P55773 120 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 BPIFB4P59827 614 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 YWHAEP62258 255 aaKnown RBP11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 DBF4BQ8NFT6 615 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
COL21A1-211ENST00000488912 C11orf49Q9H6J7 331 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SLC38A7Q9NVC3 462 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 HMGXB4Q9UGU5 601 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 DNAI1Q9UI46 699 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 TULP2O00295 520 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 SPTLC1O15269 473 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 LRPAP1P30533 357 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 CYP2C18P33260 490 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 ORC1Q13415 861 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
COL21A1-211ENST00000488912 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF560Q96MR9 790 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 CYP3A43Q9HB55 503 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 INPP5FQ9Y2H2 1132 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 MICAL3Q7RTP6 2002 aa11.66□□□□□ -0.54
COL21A1-211ENST00000488912 CILPO75339 1184 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 POMCP01189 267 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 CFHP08603 1231 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 H2AFZP0C0S5 128 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.54
COL21A1-211ENST00000488912 TTC3P53804 2025 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 GALCP54803 685 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF569Q5MCW4 686 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 H2AFVQ71UI9 128 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF677Q86XU0 584 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
COL21A1-211ENST00000488912 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 THAP12O43422 761 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 TUBB4AP04350 444 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 ABCB4P21439 1286 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 IGFBP6P24592 240 aaPredicted RBP11.65□□□□□ -0.54
COL21A1-211ENST00000488912 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
COL21A1-211ENST00000488912 PNPLA4P41247 253 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 TAF6P49848 677 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 RAD23BP54727 409 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 FAM193AP78312 1265 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 INCA1Q0VD86 236 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 SLC35F6Q8N357 371 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
COL21A1-211ENST00000488912 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 CAPN6Q9Y6Q1 641 aa11.65□□□□□ -0.54
COL21A1-211ENST00000488912 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 KPNA7A9QM74 516 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 EOMESO95936 686 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 CLCNKBP51801 687 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 LILRA4P59901 499 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 FAM189BP81408 668 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 SOWAHAQ2M3V2 549 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms