RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SLC9A6Q92581 669 aa6.21□□□□□ -1.42
PTPN4-212ENST00000488896 FBXL20Q96IG2 436 aa6.21□□□□□ -1.42
PTPN4-212ENST00000488896 VKORC1Q9BQB6 163 aa6.21□□□□□ -1.42
PTPN4-212ENST00000488896 DUSP26Q9BV47 211 aa6.21□□□□□ -1.42
PTPN4-212ENST00000488896 R3HDMLQ9H3Y0 253 aa6.21□□□□□ -1.42
PTPN4-212ENST00000488896 POU2F2P09086 479 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 CHRM3P20309 590 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 CYP2C19P33261 490 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 PIK3CGP48736 1102 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 ANXA11P50995 505 aaKnown RBP6.2□□□□□ -1.42
PTPN4-212ENST00000488896 NEK2P51955 445 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 EXOSC10Q01780 885 aaKnown RBP6.2□□□□□ -1.42
PTPN4-212ENST00000488896 THEMIS2Q5TEJ8 643 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 FBXO42Q6P3S6 717 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 RD3Q7Z3Z2 195 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 ARHGEF25Q86VW2 580 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 TFAP2BQ92481 460 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 SNX19Q92543 992 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 HOOK2Q96ED9 719 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
PTPN4-212ENST00000488896 BRINP2Q9C0B6 783 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 PRDM13Q9H4Q3 707 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 MRPS18AQ9NVS2 196 aaKnown RBP6.2□□□□□ -1.42
PTPN4-212ENST00000488896 PTGFRNQ9P2B2 879 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 CFAP97Q9P2B7 532 aa6.2□□□□□ -1.42
PTPN4-212ENST00000488896 ANXA1P04083 346 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 CHRM2P08172 466 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 CT47B1P0C2W7 299 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-212ENST00000488896 PF4V1P10720 104 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 PRDX5P30044 214 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 MAP2K6P52564 334 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 TMEM240Q5SV17 173 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 VWA1Q6PCB0 445 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 BOLLQ8N9W6 283 aaKnown RBP6.19□□□□□ -1.42
PTPN4-212ENST00000488896 SCAMP4Q969E2 229 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-212ENST00000488896 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 LMBRD1Q9NUN5 540 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 SIDT1Q9NXL6 827 aaKnown RBP6.19□□□□□ -1.42
PTPN4-212ENST00000488896 FOXJ2Q9P0K8 574 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-212ENST00000488896 NEU2Q9Y3R4 380 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 PCDHA1Q9Y5I3 950 aa6.19□□□□□ -1.42
PTPN4-212ENST00000488896 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 ARIH2O95376 493 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 AHSGP02765 367 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 PPP3CBP16298 524 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 FOLR3P41439 243 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 NPTX2P47972 431 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 RARRES1P49788 294 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 HK3P52790 923 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 KAZNQ674X7 775 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 PDSS2Q86YH6 399 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 GRAMD1CQ8IYS0 662 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 PRR18Q8N4B5 295 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 PCSK9Q8NBP7 692 aaKnown RBP6.18□□□□□ -1.42
PTPN4-212ENST00000488896 MYCBPAPQ8TBZ2 947 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 SMOC2Q9H3U7 446 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 AGAP1Q9UPQ3 857 aa6.18□□□□□ -1.42
PTPN4-212ENST00000488896 F5H697 171 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 H3BUI4 141 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 KIF20AO95235 890 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 SRGNP10124 158 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 LPOP22079 712 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-212ENST00000488896 POU6F2P78424 691 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-212ENST00000488896 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-212ENST00000488896 ZNF362Q5T0B9 420 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-212ENST00000488896 AKNAD1Q5T1N1 836 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 MICALCLQ6ZW33 695 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 PPP1R3BQ86XI6 285 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 FAM90A1Q86YD7 464 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 PDLIM2Q96JY6 352 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 HEPHQ9BQS7 1158 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 WDCPQ9H6R7 721 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 ALG13Q9NP73 1137 aaKnown RBP6.17□□□□□ -1.42
PTPN4-212ENST00000488896 KMT5AQ9NQR1 393 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 NR2E3Q9Y5X4 410 aa6.17□□□□□ -1.42
PTPN4-212ENST00000488896 M0QYG6 137 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 SLC16A6O15403 523 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 ALDH1L1O75891 902 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 GNAI2P04899 355 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 FTH1P19P0C7X4 201 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 RARBP10826 455 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 HNRNPMP52272 730 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPN4-212ENST00000488896 IGBP1P78318 339 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 TAF2Q6P1X5 1199 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 PEG10Q86TG7 708 aaKnown RBP6.16□□□□□ -1.42
PTPN4-212ENST00000488896 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 FAM9AQ8IZU1 332 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-212ENST00000488896 PSD4Q8NDX1 1056 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 MVB12AQ96EY5 273 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 MAP3K14Q99558 947 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 CNPPD1Q9BV87 410 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-212ENST00000488896 MRPL46Q9H2W6 279 aaKnown RBP6.16□□□□□ -1.42
PTPN4-212ENST00000488896 PNPOQ9NVS9 261 aa6.16□□□□□ -1.42
PTPN4-212ENST00000488896 RLIMQ9NVW2 624 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms