RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CASS4Q9NQ75 786 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 STAP2Q9UGK3 403 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 PCDHA6Q9UN73 950 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 NEU2Q9Y3R4 380 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 CCDC78A2IDD5 438 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 ERC2O15083 957 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 RAMP2O60895 175 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 UBXN7O94888 489 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 KCNA2P16389 499 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 ATF3P18847 181 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 TGFB2P61812 414 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 EXOSC9Q06265 439 aaKnown RBP5.05□□□□□ -1.6
SSR1-209ENST00000488834 KIF22Q14807 665 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 CYP2A13Q16696 494 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 GEN1Q17RS7 908 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 NXNQ6DKJ4 435 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 LAIR1Q6GTX8 287 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 TAPT1Q6NXT6 567 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 SLC30A10Q6XR72 485 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 PPP1R3BQ86XI6 285 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 FMNL3Q8IVF7 1028 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 TCEAL8Q8IYN2 117 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 MAGEB6Q8N7X4 407 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 PPP1R35Q8TAP8 253 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
SSR1-209ENST00000488834 TRIB1Q96RU8 372 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 ADAM2Q99965 735 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 ING1Q9UK53 422 aaPredicted RBP5.05□□□□□ -1.6
SSR1-209ENST00000488834 DMTF1Q9Y222 760 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 HS3ST4Q9Y661 456 aa5.05□□□□□ -1.6
SSR1-209ENST00000488834 MYADML2A6NDP7 307 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 M0QYG6 137 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 VPS4BO75351 444 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 MATN4O95460 622 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 FDXRP22570 491 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 ZEB1P37275 1124 aaPredicted RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 VAV2P52735 878 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 INHBCP55103 352 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 SOX8P57073 446 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 RPS7P62081 194 aaKnown RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 RAB1AP62820 205 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 NKX6-1P78426 367 aaPredicted RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 BLOC1S1P78537 153 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 FGL2Q14314 439 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 CD300EQ496F6 205 aaPredicted RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 ABHD17BQ5VST6 288 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 ZNF627Q7L945 461 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 ULK2Q8IYT8 1036 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 SNX19Q92543 992 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 MRIQ9BWK5 157 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 TINAGL1Q9GZM7 467 aaPredicted RBP5.04□□□□□ -1.6
SSR1-209ENST00000488834 PCED1AQ9H1Q7 454 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 FAM204AQ9H8W3 233 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 RSAD1Q9HA92 442 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 C1orf112Q9NSG2 853 aa5.04□□□□□ -1.6
SSR1-209ENST00000488834 PRAMEF33A0A0G2JMD5 474 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 A0A1W2PPL8 197 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 PIPSLA2A3N6 862 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 PRAMEF10O60809 474 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 KIF20AO95235 890 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 HKR1P10072 659 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 ANXA11P50995 505 aaKnown RBP5.03□□□□□ -1.6
SSR1-209ENST00000488834 HMGA2P52926 109 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 POU6F2P78424 691 aaPredicted RBP5.03□□□□□ -1.6
SSR1-209ENST00000488834 TAP1Q03518 808 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 HABP2Q14520 560 aaPredicted RBP5.03□□□□□ -1.6
SSR1-209ENST00000488834 GFOD2Q3B7J2 385 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 CRB2Q5IJ48 1285 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 GPR149Q86SP6 731 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 USP37Q86T82 979 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 SLC44A3Q8N4M1 653 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 AMER2Q8N7J2 671 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 ASB10Q8WXI3 467 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 NACC2Q96BF6 587 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 SORCS2Q96PQ0 1159 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 GPR35Q9HC97 309 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 TMEM74BQ9NUR3 256 aa5.03□□□□□ -1.6
SSR1-209ENST00000488834 PIH1D1Q9NWS0 290 aaKnown RBP5.03□□□□□ -1.6
SSR1-209ENST00000488834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.03□□□□□ -1.62e-11■■□□□ 14.5
SSR1-209ENST00000488834 WDR33Q9C0J8 1336 aaKnown RBP5.02□□□□□ -1.61
SSR1-209ENST00000488834 A0A1W2PS29 197 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 CAPN8A6NHC0 703 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 VSTM5A8MXK1 200 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 E9PLN8 166 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 FAM227AF5H4B4 570 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 MYO1CO00159 1063 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 SLPIP03973 132 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 HDCP19113 662 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 CHRM3P20309 590 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 ITGALP20701 1170 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 GPSM2P81274 684 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 DPTQ07507 201 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 ANO6Q4KMQ2 910 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 AMOTQ4VCS5 1084 aa5.02□□□□□ -1.61
SSR1-209ENST00000488834 HECTD2Q5U5R9 776 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms