RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SPG21Q9NZD8 308 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCM2-216ENST00000488727 SIX4Q9UIU6 781 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 V9GYY5 206 aaPredicted RBP20.8■□□□□ 0.92
CCM2-216ENST00000488727 MYO9BQ13459 2157 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 ANO9A1A5B4 782 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 FGF18O76093 207 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 NDUFA10O95299 355 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 GNA14O95837 355 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 ITGB3P05106 788 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 RPL9P32969 192 aaKnown RBP20.79■□□□□ 0.92
CCM2-216ENST00000488727 CDK17Q00537 523 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 TUBB2AQ13885 445 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 VWA3BQ502W6 1294 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 DCAF17Q5H9S7 520 aaPredicted RBP20.79■□□□□ 0.92
CCM2-216ENST00000488727 C9orf57Q5W0N0 161 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 ZNF662Q6ZS27 426 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 TRAPPC11Q7Z392 1133 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 TRIM59Q8IWR1 403 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 MNS1Q8NEH6 495 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 TUBB2BQ9BVA1 445 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.79■□□□□ 0.92
CCM2-216ENST00000488727 EPN1Q9Y6I3 576 aaPredicted RBP20.79■□□□□ 0.92
CCM2-216ENST00000488727 TRANK1O15050 2925 aa20.79■□□□□ 0.92
CCM2-216ENST00000488727 TMEM265A0A087WTH1 108 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 PIRO00625 290 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 B3GAT3O94766 335 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 TNNC2P02585 160 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 C4BPAP04003 597 aaKnown RBP20.78■□□□□ 0.92
CCM2-216ENST00000488727 PPM1AP35813 382 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ARHGAP25P42331 645 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ARHGAP29Q52LW3 1261 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 TDRD10Q5VZ19 366 aaKnown RBP20.78■□□□□ 0.92
CCM2-216ENST00000488727 WDR59Q6PJI9 974 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 DCLRE1AQ6PJP8 1040 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 C15orf39Q6ZRI6 1047 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 USP37Q86T82 979 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 FBXO22Q8NEZ5 403 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 CHP1Q99653 195 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 VN1R3Q9BXE9 311 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
CCM2-216ENST00000488727 ITGA11Q9UKX5 1188 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 TMEM189-UBE2V1I3L0A0 370 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 RB1P06400 928 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 TRIM21P19474 475 aaKnown RBP20.78■□□□□ 0.92
CCM2-216ENST00000488727 POLR2BP30876 1174 aaKnown RBP20.78■□□□□ 0.92
CCM2-216ENST00000488727 GCLMP48507 274 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ERCC6LQ2NKX8 1250 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 TCERG1LQ5VWI1 586 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 COLEC11Q9BWP8 271 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 CARD6Q9BX69 1037 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 MMRN2Q9H8L6 949 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ADAM28Q9UKQ2 775 aa20.78■□□□□ 0.92
CCM2-216ENST00000488727 ATG2AQ2TAZ0 1938 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 CARNS1A5YM72 827 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 H3BNC9 293 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 EFEMP2O95967 443 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 H2AFXP16104 143 aaPredicted RBP20.77■□□□□ 0.92
CCM2-216ENST00000488727 AP3M2P53677 418 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 PLCB3Q01970 1234 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 ZACNQ401N2 412 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 SV2AQ7L0J3 742 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 TMEM169Q96HH4 297 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 C11orf84Q9BUA3 381 aaPredicted RBP20.77■□□□□ 0.92
CCM2-216ENST00000488727 NDST4Q9H3R1 872 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 AGAP1Q9UPQ3 857 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 SIK3Q9Y2K2 1263 aa20.77■□□□□ 0.92
CCM2-216ENST00000488727 VWA8A3KMH1 1905 aa20.77■□□□□ 0.91
CCM2-216ENST00000488727 A0A0U1RQJ8 604 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 RFXAPO00287 272 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 VNN1O95497 513 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 CST3P01034 146 aaPredicted RBP20.76■□□□□ 0.91
CCM2-216ENST00000488727 KRT19P08727 400 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 HNRNPH3P31942 346 aaKnown RBP20.76■□□□□ 0.91
CCM2-216ENST00000488727 BRCC3P46736 316 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 CCDC170Q8IYT3 715 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 GDPD5Q8WTR4 605 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 ATRIPQ8WXE1 791 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 GPR62Q9BZJ7 368 aa20.76■□□□□ 0.91
CCM2-216ENST00000488727 ZNHIT6Q9NWK9 470 aaKnown RBP20.76■□□□□ 0.91
CCM2-216ENST00000488727 REXO2Q9Y3B8 237 aaKnown RBP20.76■□□□□ 0.91
CCM2-216ENST00000488727 SPTLC1O15269 473 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 GRM6O15303 877 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 TADA2AO75478 443 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 DNAJB1P25685 340 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 BIRC3Q13489 604 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 GPM6BQ13491 265 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 CBWD6Q4V339 395 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 CBWD3Q5JTY5 395 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 CBWD5Q5RIA9 395 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 ZNF697Q5TEC3 545 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 FUT10Q6P4F1 479 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 FBXO38Q6PIJ6 1188 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 RNF168Q8IYW5 571 aaPredicted RBP20.75■□□□□ 0.91
CCM2-216ENST00000488727 SPPL3Q8TCT6 385 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 UBXN4Q92575 508 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 IRX2Q9BZI1 471 aaPredicted RBP20.75■□□□□ 0.91
CCM2-216ENST00000488727 I3L4J1 428 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 LPXNO60711 386 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 GTF2H1P32780 548 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms