RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
CXCL12-207ENST00000488591 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
CXCL12-207ENST00000488591 ZDHHC7Q9NXF8 308 aa16.22■□□□□ 0.19
CXCL12-207ENST00000488591 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
CXCL12-207ENST00000488591 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 SCN1AP35498 2009 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 CCDC195A0A1B0GUA6 201 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 ZMYND10O75800 440 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 CYP11A1P05108 521 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 KRT13P13646 458 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 PSMC2P35998 433 aaKnown RBP16.21■□□□□ 0.19
CXCL12-207ENST00000488591 CASP4P49662 377 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 ROR1Q01973 937 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 LRRC63Q05C16 580 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 TRPC3Q13507 836 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 MORC3Q14149 939 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 ZCWPW2Q504Y3 356 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 RSPO2Q6UXX9 243 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-207ENST00000488591 INTS8Q75QN2 995 aaKnown RBP16.21■□□□□ 0.19
CXCL12-207ENST00000488591 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 ADHFE1Q8IWW8 467 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 FAM186BQ8IYM0 893 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 TRIML1Q8N9V2 468 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 SUSD6Q92537 303 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-207ENST00000488591 HPDLQ96IR7 371 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 COL25A1Q9BXS0 654 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-207ENST00000488591 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 KIAA1468Q9P260 1216 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 SIX4Q9UIU6 781 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 MAFFQ9ULX9 164 aa16.21■□□□□ 0.19
CXCL12-207ENST00000488591 BIN1O00499 593 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 IKBKBO14920 756 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 HNRNPA1P09651 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
CXCL12-207ENST00000488591 CPB1P15086 417 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 VAMP7P51809 220 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 CLDN10P78369 228 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CXCL12-207ENST00000488591 BIRC3Q13489 604 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 PPM1LQ5SGD2 360 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 TPGS2Q68CL5 300 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 GPR149Q86SP6 731 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 TMEM86AQ8N2M4 240 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 CXorf38Q8TB03 319 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 BORCS6Q96GS4 357 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 FAM84AQ96KN4 292 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 PHF7Q9BWX1 381 aaPredicted RBP16.2■□□□□ 0.18
CXCL12-207ENST00000488591 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 GDAP2Q9NXN4 497 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 SNX9Q9Y5X1 595 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 XIRP2A4UGR9 3374 aa16.2■□□□□ 0.18
CXCL12-207ENST00000488591 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 LRRIQ3A6PVS8 624 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-207ENST00000488591 PRRG1O14668 218 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 AKAP3O75969 853 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 ABLIM3O94929 683 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 C8AP07357 584 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 EPB41P11171 864 aaKnown RBP16.19■□□□□ 0.18
CXCL12-207ENST00000488591 ATF2P15336 505 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 CCNE1P24864 410 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-207ENST00000488591 ENPEPQ07075 957 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 ANKRD40Q6AI12 368 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 PLEKHO2Q8TD55 490 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 SMG7Q92540 1137 aaKnown RBP16.19■□□□□ 0.18
CXCL12-207ENST00000488591 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 MKNK1Q9BUB5 465 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 PRKD2Q9BZL6 878 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 CLSTN2Q9H4D0 955 aa16.19■□□□□ 0.18
CXCL12-207ENST00000488591 BICDL2A1A5D9 508 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 DLL1O00548 723 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 XYLBO75191 536 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 RFPL2O75678 378 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 CLSTN1O94985 981 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-207ENST00000488591 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 HOXA9P31269 272 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 ATICP31939 592 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 DPH6Q7L8W6 267 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 TCEAL8Q8IYN2 117 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 GJD3Q8N144 294 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 SLC7A14Q8TBB6 771 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 SPATA18Q8TC71 538 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 SYAP1Q96A49 352 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-207ENST00000488591 NECAB3Q96P71 396 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-207ENST00000488591 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-207ENST00000488591 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 CYP4F11Q9HBI6 524 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 AFF4Q9UHB7 1163 aaKnown RBP16.18■□□□□ 0.18
CXCL12-207ENST00000488591 NR2E1Q9Y466 385 aa16.18■□□□□ 0.18
CXCL12-207ENST00000488591 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
CXCL12-207ENST00000488591 STX10O60499 249 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 DLG4P78352 724 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 MYL7Q01449 175 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 ZP2Q05996 745 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms