RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 BMT2Q1RMZ1 405 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 ANO6Q4KMQ2 910 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 CCDC157Q569K6 752 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 CCDC149Q6ZUS6 474 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 SEM1Q6ZVN7 128 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 PDZD4Q76G19 769 aaPredicted RBP3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 DOK3Q7L591 496 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM90A1Q86YD7 464 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 BOLLQ8N9W6 283 aaKnown RBP3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 OR52N2Q8NGI0 321 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC9A6Q92581 669 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 NEU1Q99519 415 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 CPPED1Q9BRF8 314 aaPredicted RBP3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 NDC1Q9BTX1 674 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 SARGQ9BW04 601 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 C11orf54Q9H0W9 315 aaPredicted RBP3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 PRDM13Q9H4Q3 707 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 KMT5AQ9NQR1 393 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 DDX21Q9NR30 783 aaKnown RBP eCLIP3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 SYBUQ9NX95 663 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 MOCS1Q9NZB8 636 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 L1RE1Q9UN81 338 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 FRMD4BQ9Y2L6 1034 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 PCDHA1Q9Y5I3 950 aa3.65□□□□□ -1.83
R3HDM1-219ENST00000488035 MYADML2A6NDP7 307 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 B5MCH6 92 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 LEFTY2O00292 366 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 RNASET2O00584 256 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 PJA2O43164 708 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CAND2O75155 1236 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 MATN4O95460 622 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 ONECUT2O95948 504 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 ZBED1O96006 694 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 TRIM27P14373 513 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 TYRP1P17643 537 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 ZFP36P26651 326 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CXCR5P32302 372 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 SEC24CP53992 1094 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CLRN1P58418 232 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 MAPK7Q13164 816 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CNN3Q15417 329 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 DACT2Q5SW24 774 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 APOA5Q6Q788 366 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 DAAM2Q86T65 1068 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 LINC00476Q8WZB0 136 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 TFAP2CQ92754 450 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CDK5RAP3Q96JB5 506 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CCDC136Q96JN2 1154 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 DCLRE1CQ96SD1 692 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 APOL5Q9BWW9 433 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 BRIP1Q9BX63 1249 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 C22orf23Q9BZE7 217 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 MRPL46Q9H2W6 279 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 SPON1Q9HCB6 807 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 PNPOQ9NVS9 261 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 ANKFY1Q9P2R3 1169 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 TESQ9UGI8 421 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 PCDHA6Q9UN73 950 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 POLHQ9Y253 713 aa3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 EPN1Q9Y6I3 576 aaPredicted RBP3.64□□□□□ -1.83
R3HDM1-219ENST00000488035 CCDC78A2IDD5 438 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 CDHR4A6H8M9 788 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 CAPN8A6NHC0 703 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 AHRRA9YTQ3 701 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 ZNF185O15231 689 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 LPXNO60711 386 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 RPLP2P05387 115 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 KRT18P05783 430 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SNRPA1P09661 255 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 KITP10721 976 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC5A1P13866 664 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 NPR1P16066 1061 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 HDCP19113 662 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 EXOSC9Q06265 439 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SEMA5AQ13591 1074 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 UBXN2BQ14CS0 331 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 KIAA0753Q2KHM9 967 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 PABPC1LQ4VXU2 614 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 COBLL1Q53SF7 1204 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 CCDC93Q567U6 631 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 ATXN7L2Q5T6C5 722 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 THEMIS2Q5TEJ8 643 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 METRNLQ641Q3 311 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 MAEAQ7L5Y9 396 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM83AQ86UY5 434 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM43AQ8N2R8 423 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SIMC1Q8NDZ2 872 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 IL17RDQ8NFM7 739 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SCARB1Q8WTV0 552 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 TNPO1Q92973 898 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC39A13Q96H72 371 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 MRGPRX1Q96LB2 322 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 GSTO2Q9H4Y5 243 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 ZNF768Q9H5H4 540 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM204AQ9H8W3 233 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 SLAMF7Q9NQ25 335 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 AKIP1Q9NQ31 210 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 MAN1C1Q9NR34 630 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 MRPS18AQ9NVS2 196 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 FEZ2Q9UHY8 353 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms