RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SSH1Q8WYL5 1049 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 COA7Q96BR5 231 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 PUS7LQ9H0K6 701 aaKnown RBP5.7□□□□□ -1.5
SMC4-219ENST00000487747 WDR27A2RRH5 827 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 RHOP08100 348 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 GPD1P21695 349 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 LPOP22079 712 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 KIF23Q02241 960 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 PCBP2Q15366 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMC4-219ENST00000487747 PREPLQ4J6C6 727 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 TAPT1Q6NXT6 567 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 MICALCLQ6ZW33 695 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 SNX19Q92543 992 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 PGBD1Q96JS3 809 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 VRK1Q99986 396 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.69□□□□□ -1.5
SMC4-219ENST00000487747 AOX1Q06278 1338 aa5.69□□□□□ -1.5
SMC4-219ENST00000487747 CCDC151A5D8V7 595 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
SMC4-219ENST00000487747 CLSTN1O94985 981 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 MYBL2P10244 700 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 SLC16A1P53985 500 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 RAB39AQ14964 217 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 NBPF8Q3BBV2 869 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 SLC30A10Q6XR72 485 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 GADL1Q6ZQY3 521 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 TEKT5Q96M29 485 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 ZNF778Q96MU6 729 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 TRIB1Q96RU8 372 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 SLC29A3Q9BZD2 475 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 SMOC2Q9H3U7 446 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 TRHDEQ9UKU6 1024 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 PRKAB1Q9Y478 270 aa5.68□□□□□ -1.5
SMC4-219ENST00000487747 LRRC14BA6NHZ5 514 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 F2RL2O00254 374 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 NPTX2P47972 431 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 POU6F2P78424 691 aaPredicted RBP5.67□□□□□ -1.5
SMC4-219ENST00000487747 DSC2Q02487 901 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 SNAPC2Q13487 334 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 MTMR1Q13613 665 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 HLXQ14774 488 aaPredicted RBP5.67□□□□□ -1.5
SMC4-219ENST00000487747 ODF1Q14990 250 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 KHDC1Q4VXA5 237 aaKnown RBP5.67□□□□□ -1.5
SMC4-219ENST00000487747 SYDE2Q5VT97 1194 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 RASAL3Q86YV0 1011 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 POC1BQ8TC44 478 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 ATP8A1Q9Y2Q0 1164 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
SMC4-219ENST00000487747 NT5C1B-RDH14C9J2C7 533 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 MALP21145 153 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 CCDC93Q567U6 631 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 FAM9AQ8IZU1 332 aaPredicted RBP5.66□□□□□ -1.5
SMC4-219ENST00000487747 B3GALNT2Q8NCR0 500 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 NSUN6Q8TEA1 469 aaKnown RBP5.66□□□□□ -1.5
SMC4-219ENST00000487747 RFKQ969G6 155 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 CALCOCO1Q9P1Z2 691 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 DKK3Q9UBP4 350 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 AGAP1Q9UPQ3 857 aa5.66□□□□□ -1.5
SMC4-219ENST00000487747 FNDC1Q4ZHG4 1894 aaPredicted RBP5.65□□□□□ -1.5
SMC4-219ENST00000487747 WDR91A4D1P6 747 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 POLRMTO00411 1230 aaKnown RBP5.65□□□□□ -1.5
SMC4-219ENST00000487747 GABRDO14764 452 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 PHKA1P46020 1223 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 PSMC1P62191 440 aaKnown RBP5.65□□□□□ -1.5
SMC4-219ENST00000487747 TFF2Q03403 129 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 PIGFQ07326 219 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 C1QL2Q7Z5L3 287 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 SCARB1Q8WTV0 552 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 HAPLN3Q96S86 360 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 KMT5AQ9NQR1 393 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 KLC4Q9NSK0 619 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 ETAA1Q9NY74 926 aa5.65□□□□□ -1.5
SMC4-219ENST00000487747 A0A0B4J269 797 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 E7ENX8 843 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 ORC4O43929 436 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 KATNA1O75449 491 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 ERBB2P04626 1255 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 CELA2AP08217 269 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 CHRM3P20309 590 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
SMC4-219ENST00000487747 ZNF81P51508 661 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 TAP2Q03519 686 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 ITKQ08881 620 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 TUBB3Q13509 450 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 UAP1L1Q3KQV9 507 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 EPHA10Q5JZY3 1008 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 FCRLBQ6BAA4 426 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 TAF2Q6P1X5 1199 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 CAMKK1Q8N5S9 505 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 HASPINQ8TF76 798 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 SMOQ99835 787 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 NR2E3Q9Y5X4 410 aa5.64□□□□□ -1.51
SMC4-219ENST00000487747 WNT6Q9Y6F9 365 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms