RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CYFIP2Q96F07 1278 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 PSMB7Q99436 277 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 DNAI2Q9GZS0 605 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 WNT8AQ9H1J5 351 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 ANKZF1Q9H8Y5 726 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 KIAA1257Q9ULG3 409 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 ALG6Q9Y672 507 aa21.7■■□□□ 1.06
PHF1-209ENST00000487667 FKTNO75072 461 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 CALB1P05937 261 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 WEE2P0C1S8 567 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 C1QTNF8P60827 252 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 ALKAL1Q6UXT8 129 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 MON1BQ7L1V2 547 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 ZNF296Q8WUU4 475 aaPredicted RBP21.69■■□□□ 1.06
PHF1-209ENST00000487667 BEGAINQ9BUH8 593 aa21.69■■□□□ 1.06
PHF1-209ENST00000487667 PACSIN2Q9UNF0 486 aaPredicted RBP21.69■■□□□ 1.06
PHF1-209ENST00000487667 PGRMC1O00264 195 aaKnown RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 TLR3O15455 904 aaKnown RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 ASGR1P07306 291 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 CDH5P33151 784 aaPredicted RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 ZBTB6Q15916 424 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 RASGEF1CQ8N431 466 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 RAET1EQ8TD07 263 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 HNRNPLLQ8WVV9 542 aaKnown RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 TMEM40Q8WWA1 233 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 EIF2AQ9BY44 585 aaKnown RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 ADAM22Q9P0K1 906 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 PCNTO95613 3336 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 ATP8B1O43520 1251 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 KCNE1P15382 129 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 CYP3A5P20815 502 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 SLC1A1P43005 524 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 KCNA10Q16322 511 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 XKR4Q5GH76 650 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 FAM47CQ5HY64 1035 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 CPA5Q8WXQ8 436 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.68■■□□□ 1.064e-8■■■■□ 21.2
PHF1-209ENST00000487667 LHX5Q9H2C1 402 aa21.68■■□□□ 1.06
PHF1-209ENST00000487667 DDX20Q9UHI6 824 aaKnown RBP21.68■■□□□ 1.06
PHF1-209ENST00000487667 CCDC66A2RUB6 948 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 SPDYE4A6NLX3 237 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 RECQL4O94761 1208 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 RHOXF2BP0C7M4 288 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CCND3P30281 292 aaPredicted RBP21.67■■□□□ 1.06
PHF1-209ENST00000487667 PNPLA4P41247 253 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 INCA1Q0VD86 236 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 PPP2R5EQ16537 467 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 GDF6Q6KF10 455 aaPredicted RBP21.67■■□□□ 1.06
PHF1-209ENST00000487667 SCARA5Q6ZMJ2 495 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 KRT222Q8N1A0 295 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 USP38Q8NB14 1042 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 RHOXF2Q9BQY4 288 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 PLVAPQ9BX97 442 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CDY2AQ9Y6F7 541 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
PHF1-209ENST00000487667 THSD7BQ9C0I4 1608 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CCDC188H7C350 402 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CEP104O60308 925 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CILPO75339 1184 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 ELNP15502 786 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CLCN6P51797 869 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 TAP1Q03518 808 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 TRIM32Q13049 653 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 STILQ15468 1287 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 CCSAPQ6IQ19 270 aaPredicted RBP21.67■■□□□ 1.06
PHF1-209ENST00000487667 ARFGAP3Q9NP61 516 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 PARVAQ9NVD7 372 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 STRIP2Q9ULQ0 834 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 BARX2Q9UMQ3 279 aaPredicted RBP21.67■■□□□ 1.06
PHF1-209ENST00000487667 POLIQ9UNA4 740 aa21.67■■□□□ 1.06
PHF1-209ENST00000487667 GPR182O15218 404 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 RPS6KA5O75582 802 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 MMP8P22894 467 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 DNA2P51530 1060 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 MESDQ14696 234 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 ZNF560Q96MR9 790 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 GOLPH3Q9H4A6 298 aa21.66■■□□□ 1.06
PHF1-209ENST00000487667 NXF3Q9H4D5 531 aaKnown RBP21.66■■□□□ 1.06
PHF1-209ENST00000487667 MYO1FO00160 1098 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 DDX3YO15523 660 aaKnown RBP21.65■■□□□ 1.06
PHF1-209ENST00000487667 CAND2O75155 1236 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 VDRP11473 427 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 CTNNA2P26232 953 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 C2orf54Q08AI8 447 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 UBXN11Q5T124 520 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 TWF2Q6IBS0 349 aaKnown RBP21.65■■□□□ 1.06
PHF1-209ENST00000487667 FAM228AQ86W67 206 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 TMEM176AQ96HP8 235 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 TSEN34Q9BSV6 310 aaKnown RBP21.65■■□□□ 1.06
PHF1-209ENST00000487667 SENP6Q9GZR1 1112 aaPredicted RBP21.65■■□□□ 1.06
PHF1-209ENST00000487667 MOXD2PA6NHM9 499 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 SPOPO43791 374 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 RAD23BP54727 409 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 SCARA3Q6AZY7 606 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 PLEKHA7Q6IQ23 1121 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 SLAIN1Q8ND83 568 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 ZSWIM1Q9BR11 485 aa21.65■■□□□ 1.06
PHF1-209ENST00000487667 NOC2LQ9Y3T9 749 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms