RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PGLYRP2Q96PD5 576 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 KIAA1586Q9HCI6 787 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 AGAP1Q9UPQ3 857 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 ZFP37Q9Y6Q3 630 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-209ENST00000487617 KPNA7A9QM74 516 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 CLIC2O15247 247 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 KLRC4O43908 158 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 RHOP08100 348 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 TMEM191BP0C7N4 346 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 PTPN2P17706 415 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 PNPLA4P41247 253 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 CYP2J2P51589 502 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 SNRPFP62306 86 aaKnown RBP22.05■■□□□ 1.12
HDAC4-209ENST00000487617 TWF1Q12792 350 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 GPR17Q13304 367 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 MYBPC2Q14324 1141 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 BMT2Q1RMZ1 405 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 ELMOD1Q8N336 334 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 FBXL6Q8N531 539 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 CSGALNACT2Q8N6G5 542 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 FSIP1Q8NA03 581 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 FGF13Q92913 245 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 NXPE3Q969Y0 559 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 GDPD2Q9HCC8 539 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 ITGA11Q9UKX5 1188 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 DUSP12Q9UNI6 340 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 MRPS23Q9Y3D9 190 aaKnown RBP22.05■■□□□ 1.12
HDAC4-209ENST00000487617 MYO10Q9HD67 2058 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 ANK1P16157 1881 aa22.05■■□□□ 1.12
HDAC4-209ENST00000487617 FAM237AA0A1B0GTK4 181 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 A0A1W2PQ27 194 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 A0A1W2PQ64 194 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 A0A1W2PQD8 194 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 KRT19P08727 400 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 SURF1Q15526 300 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 KNOP1Q1ED39 458 aaKnown RBP22.04■■□□□ 1.12
HDAC4-209ENST00000487617 KMT5BQ4FZB7 885 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 WSCD1Q658N2 575 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 LMBRD2Q68DH5 695 aaPredicted RBP22.04■■□□□ 1.12
HDAC4-209ENST00000487617 THEM5Q8N1Q8 247 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 RDH13Q8NBN7 331 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 ST13P5Q8NFI4 369 aaPredicted RBP22.04■■□□□ 1.12
HDAC4-209ENST00000487617 ING5Q8WYH8 240 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 BORCS6Q96GS4 357 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 ANKRD36BP1Q96IX9 119 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 TMEM209Q96SK2 561 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 CORO1BQ9BR76 489 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 MTMR12Q9C0I1 747 aa22.04■■□□□ 1.12
HDAC4-209ENST00000487617 ANHXE9PGG2 379 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 VNN2O95498 520 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 PDGFBP01127 241 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-209ENST00000487617 MYL1P05976 194 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 NUCB2P80303 420 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 BFSP1Q12934 665 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 HTR4Q13639 388 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 IQCEQ6IPM2 695 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 SLC44A3Q8N4M1 653 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 OR10T2Q8NGX3 314 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 ZNF512Q96ME7 567 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-209ENST00000487617 AVENQ9NQS1 362 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-209ENST00000487617 INTS13Q9NVM9 706 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 YIPF1Q9Y548 306 aa22.03■■□□□ 1.12
HDAC4-209ENST00000487617 NARSO43776 548 aaKnown RBP22.02■■□□□ 1.12
HDAC4-209ENST00000487617 TNNC2P02585 160 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 RBP5P82980 135 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 STK4Q13043 487 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 DUSP4Q13115 394 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 PSMD2Q13200 908 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 SNRNP35Q16560 246 aaKnown RBP22.02■■□□□ 1.12
HDAC4-209ENST00000487617 SLC5A9Q2M3M2 681 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 NPAS3Q8IXF0 933 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 LRRC52Q8N7C0 313 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 XXYLT1Q8NBI6 393 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 ATAD1Q8NBU5 361 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 OR5B17Q8NGF7 314 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 GOLPH3LQ9H4A5 285 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 CEP72Q9P209 647 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 CGNQ9P2M7 1197 aaKnown RBP22.02■■□□□ 1.12
HDAC4-209ENST00000487617 SIX4Q9UIU6 781 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 FBXL21Q9UKT6 434 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 R3HCC1Q9Y3T6 440 aaKnown RBP22.02■■□□□ 1.12
HDAC4-209ENST00000487617 ARIH1Q9Y4X5 557 aaPredicted RBP22.02■■□□□ 1.12
HDAC4-209ENST00000487617 NUMBLQ9Y6R0 609 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 PTPRJQ12913 1337 aa22.02■■□□□ 1.12
HDAC4-209ENST00000487617 MTMR11A4FU01 709 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 PLD1Q13393 1074 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 DUOXA2Q1HG44 320 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 SCARA3Q6AZY7 606 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 CENPPQ6IPU0 288 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 PARM1Q6UWI2 310 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 PDZD4Q76G19 769 aaPredicted RBP22.01■■□□□ 1.11
HDAC4-209ENST00000487617 WDR49Q8IV35 697 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 KIAA0895Q8NCT3 520 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 CXorf38Q8TB03 319 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 RTP3Q9BQQ7 232 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 ZCWPW1Q9H0M4 648 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 CRISPLD1Q9H336 500 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 SLC27A5Q9Y2P5 690 aa22.01■■□□□ 1.11
HDAC4-209ENST00000487617 ZNF197O14709 1029 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms