RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 FAM193BQ96PV7 902 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 DHX35Q9H5Z1 703 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PIK3R2O00459 728 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 CST8O60676 142 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 RGS7P49802 495 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 NAA25Q14CX7 972 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 SHC3Q92529 594 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 CISHQ9NSE2 258 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 SSX2IPQ9Y2D8 614 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 NCANO14594 1321 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PYGMP11217 842 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 SPIRE1Q08AE8 756 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 LAMTOR4Q0VGL1 99 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 C1orf228Q6PIY5 440 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 MTMR14Q8NCE2 650 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PORCNQ9H237 461 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PPME1Q9Y570 386 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PCDHA3Q9Y5H8 950 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 KRT38O76015 456 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PCK1P35558 622 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 TSNAXIP1Q2TAA8 658 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ANO5Q75V66 913 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 GPC2Q8N158 579 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ZBTB45Q96K62 511 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
TRA2B-214ENST00000487615 NFASCO94856 1347 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TOGARAM1Q9Y4F4 1720 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 MAGEA4P43358 317 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 ZNF484Q5JVG2 852 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 HEATR6Q6AI08 1181 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TNIP3Q96KP6 325 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 ACP6Q9NPH0 428 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 WHRNQ9P202 907 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 COPEO14579 308 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TMEM132BQ14DG7 1078 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 GEN1Q17RS7 908 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TMC3Q7Z5M5 1100 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 ANKMY2Q8IV38 441 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 CDKL3Q8IVW4 592 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 BRSK2Q8IWQ3 736 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 AFAP1L2Q8N4X5 818 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 EXD1Q8NHP7 514 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 DEPDC1BQ8WUY9 529 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 ZNF606Q8WXB4 792 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 KRT35Q92764 455 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 VCPIP1Q96JH7 1222 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 CCL15-CCL14A0A0B4J2E2 113 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 CXCL11O14625 94 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 APOL1O14791 398 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 RBP3P10745 1247 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 UBA1P22314 1058 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 CCL15Q16663 113 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 MAP7D1Q3KQU3 841 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TBC1D1Q86TI0 1168 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 PPM1NQ8N819 430 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 THOC1Q96FV9 657 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 METTL5Q9NRN9 209 aaKnown RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 HAUS2Q9NVX0 235 aa12.44□□□□□ -0.42
TRA2B-214ENST00000487615 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-214ENST00000487615 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 ZFXP17010 805 aaPredicted RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CALRP27797 417 aaKnown RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 HES6Q96HZ4 224 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 COL20A1Q9P218 1284 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CHD4Q14839 1912 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 DCTN3O75935 186 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SRGAP2BP0DMP2 458 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CETPP11597 493 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 NOVP48745 357 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 RTP1P59025 263 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SIAH1Q8IUQ4 282 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 PCDHA2Q9Y5H9 948 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 TMEM120BA0PK00 339 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 TRIM66O15016 1216 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SPAG7O75391 227 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms