RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 UQCRBP14927 111 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 GAP43P17677 238 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RFX1P22670 979 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 HIBADHP31937 336 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RPL5P46777 297 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 PSMD7P51665 324 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ARL4CP56559 192 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 C12orf60Q5U649 245 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 SUSD4Q5VX71 490 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RAPH1Q70E73 1250 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ARPINQ7Z6K5 226 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 TTC7BQ86TV6 843 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 CPNE8Q86YQ8 564 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 SLFN12Q8IYM2 578 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 PYROXD1Q8WU10 500 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 SPIRE2Q8WWL2 714 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 AZIN2Q96A70 460 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 PSTPIP2Q9H939 334 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 CYP4F11Q9HBI6 524 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 GINM1Q9NU53 330 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 UVRAGQ9P2Y5 699 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 NENFQ9UMX5 172 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ZNF510Q9Y2H8 683 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 DTNAQ9Y4J8 743 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 NUP188Q5SRE5 1749 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RGPD5Q99666 1765 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 C2orf71A6NGG8 1288 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MEI4A8MW99 385 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MED24O75448 989 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 LDHBP07195 334 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 BGNP21810 368 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 NMT1P30419 496 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 CENPCQ03188 943 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 PPIDQ08752 370 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 SLC35G1Q2M3R5 365 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 EFHC1Q5JVL4 640 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 LPCAT4Q643R3 524 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 TSHZ1Q6ZSZ6 1077 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ANKRD23Q86SG2 305 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 NCSTNQ92542 709 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MARCOQ9UEW3 520 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 TAGLN3Q9UI15 199 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MAGEC1O60732 1142 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 INHBAP08476 426 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 RALAP11233 206 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CHRNB2P17787 502 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ARSEP51690 589 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 INHBCP55103 352 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 KRT72Q14CN4 511 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CNGA3Q16281 694 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 KLHL38Q2WGJ6 581 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PATL1Q86TB9 770 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PPP1R14BQ96C90 147 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 FAM111AQ96PZ2 611 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 MRPL1Q9BYD6 325 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 NMUR2Q9GZQ4 415 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PPCSQ9HAB8 311 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 SLC24A2Q9UI40 661 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PPM1HQ9ULR3 514 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 WDR37Q9Y2I8 494 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ASTN1O14525 1302 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CAMTA1Q9Y6Y1 1673 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 SGK1O00141 431 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PIK3CDO00329 1044 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 FSCN2O14926 492 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CHMP2AO43633 222 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ATP9BO43861 1147 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 LDHCP07864 332 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 RARBP10826 455 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 GJA8P48165 433 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 NT5C2P49902 561 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 GEMIN4P57678 1058 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 NOP14P78316 857 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 BFSP1Q12934 665 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 KIF22Q14807 665 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 BBS9Q3SYG4 887 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ANKRD20A4Q4UJ75 823 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CBWD6Q4V339 395 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CBWD3Q5JTY5 395 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CBWD5Q5RIA9 395 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 RHBDF2Q6PJF5 856 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ALYREFQ86V81 257 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CRLF3Q8IUI8 442 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ARID3BQ8IVW6 561 aaPredicted RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 CTAGE3PQ8IX95 158 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ZCCHC9Q8N567 271 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 TRIML2Q8N7C3 387 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ATP11CQ8NB49 1132 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 RBM15BQ8NDT2 890 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 PTCD3Q96EY7 689 aaKnown RBP6.56□□□□□ -1.36
VPS13D-209ENST00000487188 ACAP3Q96P50 834 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 TIMMDC1Q9NPL8 285 aa6.56□□□□□ -1.36
VPS13D-209ENST00000487188 DDX43Q9NXZ2 648 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms