RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 DRICH1Q6PGQ1 229 aaPredicted RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 RCOR2Q8IZ40 523 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ALLCQ8N6M5 410 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ARMC2Q8NEN0 867 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 PPCSQ9HAB8 311 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NFASCO94856 1347 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 A0A1W2PPM1 405 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NFIBO00712 420 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 CBX6O95503 412 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ICAM1P05362 532 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 CFHP08603 1231 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 KRT10P13645 584 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ETS1P14921 441 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 EPHB2P29323 1055 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ARSEP51690 589 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NOMO3P69849 1222 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 GPS1Q13098 491 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 MORF4L2Q15014 288 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 CMPK2Q5EBM0 449 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 KAZNQ674X7 775 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 TRIM72Q6ZMU5 477 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 OTOAQ7RTW8 1153 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 CLEC4DQ8WXI8 215 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 OSBPL1AQ9BXW6 950 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 TLE6Q9H808 572 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 SLC24A2Q9UI40 661 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 RPL26L1Q9UNX3 145 aaKnown RBP12.9□□□□□ -0.34
COL3A1-206ENST00000487010 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
COL3A1-206ENST00000487010 PI4K2BG5E9Z4 385 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 C2CD2LO14523 706 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TLR3O15455 904 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 FGFR1P11362 822 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 GARTP22102 1010 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 PTGER2P43116 358 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ATP13A4Q4VNC1 1196 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TAF1BQ53T94 588 aaPredicted RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 PHF13Q86YI8 300 aaPredicted RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 PASD1Q8IV76 773 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ABRAQ8N0Z2 381 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 FEZF2Q8TBJ5 459 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ASAP3Q8TDY4 903 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SLITRK1Q96PX8 696 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SSU72Q9NP77 194 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 PSMC3IPQ9P2W1 217 aaPredicted RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 DRG1Q9Y295 367 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TJP3O95049 919 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 CCNE2O96020 404 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ATP6V1C1P21283 382 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 PTPN4P29074 926 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 CAP2P40123 477 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 JAK3P52333 1124 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 RNASEH2BQ5TBB1 312 aaKnown RBP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TRIM68Q6AZZ1 485 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 LVRNQ6Q4G3 990 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 CENPUQ71F23 418 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 NLRP9Q7RTR0 991 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 TTC8Q8TAM2 541 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 SAR1AQ9NR31 198 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
COL3A1-206ENST00000487010 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
COL3A1-206ENST00000487010 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
COL3A1-206ENST00000487010 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
COL3A1-206ENST00000487010 ATP9AO75110 1047 aa12.88□□□□□ -0.35
COL3A1-206ENST00000487010 ZWINTO95229 277 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms