RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	ZNF185	O15231	689 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	NCR1	O76036	304 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	POU3F2	P20265	443 aa	Predicted RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	CTCF	P49711	727 aa	Predicted RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	TRIM25	Q14258	630 aa	Known RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	UBE3C	Q15386	1083 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	SEPT7	Q16181	437 aa	Known RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	DEFB115	Q30KQ5	88 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	TKFC	Q3LXA3	575 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	COLEC12	Q5KU26	742 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	OLFM4	Q6UX06	510 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	CNTROB	Q8N137	903 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	EFHB	Q8N7U6	833 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	ZNF764	Q96H86	408 aa	Predicted RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	WDR11	Q9BZH6	1224 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	TOR3A	Q9H497	397 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	SERHL2	Q9H4I8	314 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	MIS18A	Q9NYP9	233 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	MAP3K15	Q6ZN16	1313 aa		5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.16	□□□□□ -1.58
SNRNP40-205	ENST00000486941	RIC1	Q4ADV7	1423 aa		5.15	□□□□□ -1.58
SNRNP40-205	ENST00000486941	B3GALT2	O43825	422 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ZSCAN20	P17040	1043 aa	Predicted RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	LAG3	P18627	525 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	EIF4A1	P60842	406 aa	Known RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	FOXI1	Q12951	378 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	TIGD2	Q4W5G0	525 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	KIF6	Q6ZMV9	814 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	DOK3	Q7L591	496 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	FAM83A	Q86UY5	434 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	KIF18B	Q86Y91	864 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ZNF34	Q8IZ26	560 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NGEF	Q8N5V2	710 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	CDYL2	Q8N8U2	506 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	IL17RA	Q96F46	866 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RBM17	Q96I25	401 aa	Known RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NEU1	Q99519	415 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	SLC46A2	Q9BY10	475 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	VPS33B	Q9H267	617 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PNN	Q9H307	717 aa	Known RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	EVL	Q9UI08	416 aa	Predicted RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RRP7A	Q9Y3A4	280 aa	Known RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RNF123	Q5XPI4	1314 aa		5.15	□□□□□ -1.59
SNRNP40-205	ENST00000486941	KIAA0355	O15063	1070 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	TMEM127	O75204	238 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RHOBTB3	O94955	611 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	CD40	P25942	277 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	GZMK	P49863	264 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	MAP2K1	Q02750	393 aa	Predicted RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NFE2L2	Q16236	605 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	BEAN1	Q3B7T3	259 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PARP10	Q53GL7	1025 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	SLC10A5	Q5PT55	438 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	SUSD4	Q5VX71	490 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ABHD15	Q6UXT9	468 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	USP50	Q70EL3	339 aa	Predicted RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PPP1R42	Q7Z4L9	355 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ZZZ3	Q8IYH5	903 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	GAB3	Q8WWW8	586 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RNPC3	Q96LT9	517 aa	Known RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PLEKHF1	Q96S99	279 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ADAM2	Q99965	735 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	TMX4	Q9H1E5	349 aa	Predicted RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PIF1	Q9H611	641 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	AKIP1	Q9NQ31	210 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	SPTLC3	Q9NUV7	552 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	IFT57	Q9NWB7	429 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	TRPM5	Q9NZQ8	1165 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ZNHIT2	Q9UHR6	403 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	EIF2B4	Q9UI10	523 aa	Known RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PPP2R3B	Q9Y5P8	575 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	POLR2A	P24928	1970 aa	Known RBP	5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ABCC12	Q96J65	1359 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ANKRD36C	Q5JPF3	1778 aa		5.14	□□□□□ -1.59
SNRNP40-205	ENST00000486941	COL4A5	P29400	1685 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	BBOX1	O75936	387 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NTSR2	O95665	410 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	HSPA8	P11142	646 aa	Known RBP	5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	MYL6B	P14649	208 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	TYRP1	P17643	537 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	GPT	P24298	496 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	FLT3	P36888	993 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	EPS15	P42566	896 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	PTH2R	P49190	550 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	LBX1	P52954	281 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RNASE9	P60153	205 aa	Known RBP	5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NHLH2	Q02577	135 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	CCDC62	Q6P9F0	684 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ESPNL	Q6ZVH7	1005 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	GDF7	Q7Z4P5	450 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	ARHGEF19	Q8IW93	802 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	NIM1K	Q8IY84	436 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	SUPT20H	Q8NEM7	779 aa		5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	UTP14A	Q9BVJ6	771 aa	Known RBP	5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.13	□□□□□ -1.59
SNRNP40-205	ENST00000486941	R3HDML	Q9H3Y0	253 aa		5.13	□□□□□ -1.59

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